Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.01□□□□□ -1.61
SSRP1Q08945 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SSRP1Q08945 MIR6810-201ENST00000622701 70 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 AP003122.6-201ENST00000623831 495 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 AL136313.1-201ENST00000624804 202 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSRP1Q08945 AC140479.6-201ENST00000633535 357 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSRP1Q08945 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSRP1Q08945 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.01□□□□□ -1.61
SSRP1Q08945 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SSRP1Q08945 AC015813.6-201ENST00000624409 5808 ntBASIC5.01□□□□□ -1.61
SSRP1Q08945 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.01□□□□□ -1.61
SSRP1Q08945 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
SSRP1Q08945 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSRP1Q08945 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SSRP1Q08945 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSRP1Q08945 AC083843.3-201ENST00000623679 2186 ntBASIC5□□□□□ -1.61
SSRP1Q08945 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SSRP1Q08945 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5□□□□□ -1.61
SSRP1Q08945 RNU6-223P-201ENST00000362830 107 ntBASIC5□□□□□ -1.61
SSRP1Q08945 RNA5SP28-201ENST00000363841 119 ntBASIC5□□□□□ -1.61
SSRP1Q08945 MIR558-201ENST00000384920 94 ntBASIC5□□□□□ -1.61
SSRP1Q08945 AL583835.1-201ENST00000399570 407 ntBASIC5□□□□□ -1.61
SSRP1Q08945 AL109755.1-201ENST00000401791 649 ntBASIC5□□□□□ -1.61
SSRP1Q08945 FAR2P2-201ENST00000413041 594 ntBASIC5□□□□□ -1.61
SSRP1Q08945 RPS12P23-201ENST00000419579 400 ntBASIC5□□□□□ -1.61
SSRP1Q08945 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5□□□□□ -1.61
SSRP1Q08945 FAR2P4-202ENST00000425399 584 ntBASIC5□□□□□ -1.61
SSRP1Q08945 AL732292.1-201ENST00000426692 226 ntBASIC5□□□□□ -1.61
SSRP1Q08945 RPS29P17-201ENST00000430795 166 ntBASIC5□□□□□ -1.61
SSRP1Q08945 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5□□□□□ -1.61
SSRP1Q08945 AC005094.1-201ENST00000440420 368 ntBASIC5□□□□□ -1.61
SSRP1Q08945 AC016691.1-201ENST00000441321 413 ntBASIC5□□□□□ -1.61
SSRP1Q08945 AC114755.5-201ENST00000447760 831 ntBASIC5□□□□□ -1.61
SSRP1Q08945 AC006480.1-201ENST00000449887 378 ntBASIC5□□□□□ -1.61
SSRP1Q08945 AC009220.1-201ENST00000451614 275 ntBASIC5□□□□□ -1.61
SSRP1Q08945 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5□□□□□ -1.61
SSRP1Q08945 AC079804.1-201ENST00000461922 436 ntBASIC5□□□□□ -1.61
SSRP1Q08945 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5□□□□□ -1.61
SSRP1Q08945 AC108145.1-201ENST00000503770 153 ntBASIC5□□□□□ -1.61
SSRP1Q08945 HSPD1P15-201ENST00000505573 1122 ntBASIC5□□□□□ -1.61
SSRP1Q08945 AC098799.2-201ENST00000509466 868 ntBASIC5□□□□□ -1.61
SSRP1Q08945 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5□□□□□ -1.61
SSRP1Q08945 RNU7-51P-201ENST00000516560 62 ntBASIC5□□□□□ -1.61
SSRP1Q08945 RNU6-64P-201ENST00000517119 105 ntBASIC5□□□□□ -1.61
SSRP1Q08945 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5□□□□□ -1.61
SSRP1Q08945 AP001646.1-201ENST00000527936 915 ntBASIC5□□□□□ -1.61
SSRP1Q08945 PDCD5P1-201ENST00000543528 309 ntBASIC5□□□□□ -1.61
SSRP1Q08945 AC128657.1-201ENST00000549459 145 ntBASIC5□□□□□ -1.61
SSRP1Q08945 CBX3P5-201ENST00000552017 521 ntBASIC5□□□□□ -1.61
SSRP1Q08945 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5□□□□□ -1.61
SSRP1Q08945 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5□□□□□ -1.61
SSRP1Q08945 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5□□□□□ -1.61
SSRP1Q08945 AC090616.5-202ENST00000582111 297 ntBASIC5□□□□□ -1.61
SSRP1Q08945 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5□□□□□ -1.61
SSRP1Q08945 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5□□□□□ -1.61
SSRP1Q08945 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSRP1Q08945 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SSRP1Q08945 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5□□□□□ -1.61
SSRP1Q08945 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5□□□□□ -1.61
SSRP1Q08945 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSRP1Q08945 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SSRP1Q08945 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSRP1Q08945 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.99□□□□□ -1.61
SSRP1Q08945 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSRP1Q08945 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SSRP1Q08945 RNU6-1155P-201ENST00000363554 107 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 Y_RNA.367-201ENST00000365544 101 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 SNORA69-201ENST00000383895 132 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 MIR141-201ENST00000384975 95 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SSRP1Q08945 U3.22-201ENST00000391120 215 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 RNA5SP107-201ENST00000411358 122 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.99□□□□□ -1.61
SSRP1Q08945 RPS23P10-201ENST00000416185 486 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 AL161631.1-201ENST00000417933 486 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 RBMY1KP-201ENST00000423480 476 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 MED13P1-201ENST00000428342 171 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 DNAJC19P7-201ENST00000428811 344 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.99□□□□□ -1.61
SSRP1Q08945 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.99□□□□□ -1.61
SSRP1Q08945 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.99□□□□□ -1.61
SSRP1Q08945 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.99□□□□□ -1.61
SSRP1Q08945 DDX3P2-201ENST00000446138 111 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 RNU7-63P-201ENST00000459054 62 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 RPS26P28-201ENST00000470806 348 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 SNORD27.1-201ENST00000516319 72 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 AF235103.2-201ENST00000525753 346 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSRP1Q08945 AC006064.5-201ENST00000541782 248 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.99□□□□□ -1.61
SSRP1Q08945 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.99□□□□□ -1.61
SSRP1Q08945 AC005730.3-201ENST00000583067 366 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 AC068790.4-201ENST00000602474 263 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 AL356218.2-201ENST00000605264 187 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 MIR6130-201ENST00000619419 109 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 MIR7154-201ENST00000620673 73 ntBASIC4.99□□□□□ -1.61
SSRP1Q08945 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.99□□□□□ -1.61
SSRP1Q08945 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms