Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 PLCE1P1-201ENST00000622094 305 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.42□□□□□ -1.86
GABPAQ06546 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.42□□□□□ -1.86
GABPAQ06546 MIR4278-201ENST00000636094 69 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 MIR1322-201ENST00000638013 71 ntBASIC3.42□□□□□ -1.86
GABPAQ06546 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
GABPAQ06546 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.41□□□□□ -1.86
GABPAQ06546 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.41□□□□□ -1.86
GABPAQ06546 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
GABPAQ06546 Y_RNA.192-201ENST00000363977 102 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 RNA5SP189-201ENST00000364920 115 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
GABPAQ06546 SNORA46-201ENST00000384762 135 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 AL031121.1-201ENST00000406553 254 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 AC007390.1-201ENST00000415722 356 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.41□□□□□ -1.86
GABPAQ06546 USP9YP25-201ENST00000457708 443 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
GABPAQ06546 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.41□□□□□ -1.86
GABPAQ06546 AC116353.3-201ENST00000511215 249 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.41□□□□□ -1.86
GABPAQ06546 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.41□□□□□ -1.86
GABPAQ06546 PDCL2P2-201ENST00000533651 189 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
GABPAQ06546 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.41□□□□□ -1.86
GABPAQ06546 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.41□□□□□ -1.86
GABPAQ06546 AC069304.2-201ENST00000605154 435 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 AL450336.1-201ENST00000605180 586 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 ATP1B3P1-201ENST00000605365 821 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.41□□□□□ -1.86
GABPAQ06546 AC109809.1-201ENST00000619665 545 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 AC013470.4-201ENST00000619978 986 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.41□□□□□ -1.86
GABPAQ06546 AC068787.1-201ENST00000623908 691 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 AC048347.1-201ENST00000624621 427 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 AC091925.2-201ENST00000625059 256 ntBASIC3.41□□□□□ -1.86
GABPAQ06546 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.41□□□□□ -1.86
GABPAQ06546 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.41□□□□□ -1.86
GABPAQ06546 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
GABPAQ06546 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
GABPAQ06546 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
GABPAQ06546 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
GABPAQ06546 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
GABPAQ06546 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
GABPAQ06546 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
GABPAQ06546 RNU6-600P-201ENST00000362524 99 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 RNU6-878P-201ENST00000384578 110 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 RNU2-15P-201ENST00000410692 191 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.4□□□□□ -1.87
GABPAQ06546 AL592310.1-201ENST00000414330 671 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 TIMM9P2-201ENST00000419324 266 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 RPS15AP6-201ENST00000420703 385 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.4□□□□□ -1.87
GABPAQ06546 USP9YP36-201ENST00000424581 829 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 PSMA6P3-201ENST00000428242 164 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 ARF4P2-201ENST00000430209 526 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.4□□□□□ -1.87
GABPAQ06546 RPL23AP74-201ENST00000437246 471 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
GABPAQ06546 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.4□□□□□ -1.87
GABPAQ06546 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.4□□□□□ -1.87
GABPAQ06546 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.4□□□□□ -1.87
GABPAQ06546 AC108938.1-201ENST00000451204 136 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 OFD1P3Y-201ENST00000453312 783 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.4□□□□□ -1.87
GABPAQ06546 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.4□□□□□ -1.87
GABPAQ06546 RPS15AP17-201ENST00000470598 390 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.4□□□□□ -1.87
GABPAQ06546 RN7SL633P-201ENST00000488974 297 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.4□□□□□ -1.87
GABPAQ06546 AC114967.1-201ENST00000504890 259 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.4□□□□□ -1.87
GABPAQ06546 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.4□□□□□ -1.87
GABPAQ06546 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
GABPAQ06546 RNU6-583P-201ENST00000516012 92 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 RNU6-27P-201ENST00000516146 107 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.4□□□□□ -1.87
GABPAQ06546 AC104986.1-201ENST00000517978 436 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.4□□□□□ -1.87
GABPAQ06546 MTND2P32-201ENST00000521584 1038 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 HIGD1AP10-201ENST00000527837 282 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 OR5D17P-201ENST00000531492 978 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.4□□□□□ -1.87
GABPAQ06546 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.4□□□□□ -1.87
GABPAQ06546 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.4□□□□□ -1.87
GABPAQ06546 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.4□□□□□ -1.87
GABPAQ06546 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.4□□□□□ -1.87
GABPAQ06546 MIR4637-201ENST00000582405 84 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.4□□□□□ -1.87
GABPAQ06546 XIAPP1-201ENST00000603162 600 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 AC103881.1-201ENST00000603476 538 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 AC006023.1-201ENST00000603944 259 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 AC131235.4-201ENST00000609288 620 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 AC243773.3-201ENST00000613270 256 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 AC006386.1-201ENST00000619436 415 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.4□□□□□ -1.87
GABPAQ06546 AC116618.1-201ENST00000634617 774 ntBASIC3.4□□□□□ -1.87
GABPAQ06546 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
GABPAQ06546 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.39□□□□□ -1.87
GABPAQ06546 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms