Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AGGF1P8-201ENST00000562979 1000 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.32□□□□□ -2.2
PRKDCP78527 AC034102.8-201ENST00000615146 484 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
PRKDCP78527 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
PRKDCP78527 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.31□□□□□ -2.2
PRKDCP78527 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.31□□□□□ -2.2
PRKDCP78527 KATNBL1P3-201ENST00000443475 909 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 AP000852.1-201ENST00000472460 573 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 MTND5P12-201ENST00000502851 1449 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 NDUFB4P9-201ENST00000511646 388 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 AC016957.1-201ENST00000534895 309 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.31□□□□□ -2.2
PRKDCP78527 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.31□□□□□ -2.2
PRKDCP78527 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.31□□□□□ -2.2
PRKDCP78527 AC091488.1-201ENST00000604239 660 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
PRKDCP78527 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.31□□□□□ -2.2
PRKDCP78527 OR4G1P-203ENST00000641984 1631 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 SNORA7.1-201ENST00000363750 139 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 RNU2-20P-201ENST00000410425 191 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 AC239798.3-201ENST00000454459 408 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.31□□□□□ -2.2
PRKDCP78527 MTCYBP17-201ENST00000503579 789 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 AP005660.1-201ENST00000522972 293 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.31□□□□□ -2.2
PRKDCP78527 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 AC060766.3-201ENST00000591442 263 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.31□□□□□ -2.2
PRKDCP78527 AL353746.1-201ENST00000566293 6881 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
PRKDCP78527 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
PRKDCP78527 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
PRKDCP78527 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC1.31□□□□□ -2.2
PRKDCP78527 MIR598-201ENST00000384868 97 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1.31□□□□□ -2.2
PRKDCP78527 RNU6-717P-201ENST00000459076 104 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.31□□□□□ -2.2
PRKDCP78527 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.31□□□□□ -2.2
PRKDCP78527 AL356575.1-201ENST00000603008 283 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 AP001005.3-201ENST00000622049 129 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.31□□□□□ -2.2
PRKDCP78527 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.31□□□□□ -2.2
PRKDCP78527 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.31□□□□□ -2.2
PRKDCP78527 AC092447.7-201ENST00000422212 1621 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.3□□□□□ -2.2
PRKDCP78527 TRIM60P13-201ENST00000432350 1283 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.3□□□□□ -2.2
PRKDCP78527 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.3□□□□□ -2.2
PRKDCP78527 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
PRKDCP78527 AC080078.3-201ENST00000605407 463 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.3□□□□□ -2.2
PRKDCP78527 AC067852.7-201ENST00000623270 535 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 BX649567.1-201ENST00000642071 1134 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.3□□□□□ -2.2
PRKDCP78527 GSTA11P-201ENST00000452866 669 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 MYL12BP1-201ENST00000569826 507 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 AC103987.3-201ENST00000582071 292 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 AL450326.2-201ENST00000421913 1962 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 AC103988.1-201ENST00000566382 2177 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PRKDCP78527 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.3□□□□□ -2.2
PRKDCP78527 RPL7P46-201ENST00000425129 740 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 HIGD1AP11-201ENST00000438361 280 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 IFNWP4-201ENST00000453148 294 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 RPS15AP36-201ENST00000492022 382 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 ARL4AP2-201ENST00000507378 601 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.3□□□□□ -2.2
PRKDCP78527 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.3□□□□□ -2.2
PRKDCP78527 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.3□□□□□ -2.2
PRKDCP78527 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.3□□□□□ -2.2
PRKDCP78527 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
PRKDCP78527 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
PRKDCP78527 UBE2L2-201ENST00000254302 429 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 TAS2R15P-201ENST00000390674 928 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 RNU6-174P-201ENST00000410406 106 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 RN7SKP123-201ENST00000410732 291 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 AL513331.1-201ENST00000411908 397 ntBASIC1.3□□□□□ -2.2
PRKDCP78527 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.3□□□□□ -2.2
PRKDCP78527 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.3□□□□□ -2.2
PRKDCP78527 RNU1-93P-201ENST00000364704 169 ntBASIC1.29□□□□□ -2.2
PRKDCP78527 RNA5SP239-201ENST00000410218 129 ntBASIC1.29□□□□□ -2.2
PRKDCP78527 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.29□□□□□ -2.2
PRKDCP78527 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.29□□□□□ -2.2
PRKDCP78527 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.29□□□□□ -2.2
PRKDCP78527 AC092326.2-201ENST00000624772 1561 ntBASIC1.29□□□□□ -2.2
PRKDCP78527 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
PRKDCP78527 AL512283.1-201ENST00000606756 1384 ntBASIC1.29□□□□□ -2.2
PRKDCP78527 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
PRKDCP78527 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.29□□□□□ -2.2
PRKDCP78527 AL138787.1-202ENST00000437804 898 ntBASIC1.29□□□□□ -2.2
PRKDCP78527 MTND6P18-201ENST00000439477 513 ntBASIC1.29□□□□□ -2.2
PRKDCP78527 AC090819.1-201ENST00000523800 1111 ntBASIC1.29□□□□□ -2.2
PRKDCP78527 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.29□□□□□ -2.2
PRKDCP78527 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.29□□□□□ -2.2
PRKDCP78527 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
PRKDCP78527 MTND4P23-201ENST00000447723 1363 ntBASIC1.29□□□□□ -2.2
PRKDCP78527 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
PRKDCP78527 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms