Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.79□□□□□ -2.12
ABCA4P78363 AC093591.3-201ENST00000634516 308 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.79□□□□□ -2.12
ABCA4P78363 PABPC1P7-201ENST00000413177 1513 ntBASIC1.79□□□□□ -2.12
ABCA4P78363 AP005901.5-201ENST00000545779 1796 ntBASIC1.78□□□□□ -2.12
ABCA4P78363 RNU6-799P-201ENST00000363567 107 ntBASIC1.78□□□□□ -2.12
ABCA4P78363 AC019129.1-201ENST00000403786 261 ntBASIC1.78□□□□□ -2.12
ABCA4P78363 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.78□□□□□ -2.12
ABCA4P78363 AL513343.1-201ENST00000451818 792 ntBASIC1.78□□□□□ -2.12
ABCA4P78363 SNRPGP9-201ENST00000456025 225 ntBASIC1.78□□□□□ -2.12
ABCA4P78363 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.78□□□□□ -2.12
ABCA4P78363 OR52A4P-203ENST00000498233 1014 ntBASIC1.78□□□□□ -2.12
ABCA4P78363 RN7SKP277-201ENST00000516895 283 ntBASIC1.78□□□□□ -2.12
ABCA4P78363 AC109635.4-202ENST00000531666 412 ntBASIC1.78□□□□□ -2.12
ABCA4P78363 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.78□□□□□ -2.12
ABCA4P78363 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.78□□□□□ -2.12
ABCA4P78363 MAGOH2P-202ENST00000584384 429 ntBASIC1.78□□□□□ -2.12
ABCA4P78363 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.78□□□□□ -2.12
ABCA4P78363 AL133393.1-201ENST00000603277 287 ntBASIC1.78□□□□□ -2.12
ABCA4P78363 AL359821.1-201ENST00000605519 182 ntBASIC1.78□□□□□ -2.12
ABCA4P78363 snoU13.31-201ENST00000607291 104 ntBASIC1.78□□□□□ -2.12
ABCA4P78363 U73479.1-201ENST00000618062 168 ntBASIC1.78□□□□□ -2.12
ABCA4P78363 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.78□□□□□ -2.12
ABCA4P78363 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
ABCA4P78363 AP002907.1-201ENST00000606361 1430 ntBASIC1.78□□□□□ -2.12
ABCA4P78363 AC004520.1-201ENST00000608362 1413 ntBASIC1.78□□□□□ -2.12
ABCA4P78363 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.78□□□□□ -2.12
ABCA4P78363 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.78□□□□□ -2.12
ABCA4P78363 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
ABCA4P78363 RNU6-707P-201ENST00000364647 95 ntBASIC1.78□□□□□ -2.13
ABCA4P78363 OR5H15-201ENST00000383696 930 ntBASIC1.78□□□□□ -2.13
ABCA4P78363 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.78□□□□□ -2.13
ABCA4P78363 RPL23AP33-201ENST00000442301 452 ntBASIC1.78□□□□□ -2.13
ABCA4P78363 AL445669.2-201ENST00000454425 421 ntBASIC1.78□□□□□ -2.13
ABCA4P78363 AC007182.2-201ENST00000489251 402 ntBASIC1.78□□□□□ -2.13
ABCA4P78363 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.78□□□□□ -2.13
ABCA4P78363 MLLT10P2-201ENST00000506434 249 ntBASIC1.78□□□□□ -2.13
ABCA4P78363 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.78□□□□□ -2.13
ABCA4P78363 AC026412.2-201ENST00000512270 1075 ntBASIC1.78□□□□□ -2.13
ABCA4P78363 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.78□□□□□ -2.13
ABCA4P78363 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.78□□□□□ -2.13
ABCA4P78363 AC090616.5-202ENST00000582111 297 ntBASIC1.78□□□□□ -2.13
ABCA4P78363 AL589994.2-201ENST00000621124 579 ntBASIC1.78□□□□□ -2.13
ABCA4P78363 AC002064.3-201ENST00000623448 346 ntBASIC1.78□□□□□ -2.13
ABCA4P78363 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.78□□□□□ -2.13
ABCA4P78363 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.78□□□□□ -2.13
ABCA4P78363 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.78□□□□□ -2.13
ABCA4P78363 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ABCA4P78363 BTBD10P2-201ENST00000404779 676 ntBASIC1.77□□□□□ -2.13
ABCA4P78363 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.77□□□□□ -2.13
ABCA4P78363 DPPA2P1-201ENST00000428060 556 ntBASIC1.77□□□□□ -2.13
ABCA4P78363 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.77□□□□□ -2.13
ABCA4P78363 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.77□□□□□ -2.13
ABCA4P78363 HMGN2P13-201ENST00000476476 274 ntBASIC1.77□□□□□ -2.13
ABCA4P78363 AC108120.2-201ENST00000512973 294 ntBASIC1.77□□□□□ -2.13
ABCA4P78363 AC126177.3-201ENST00000551839 688 ntBASIC1.77□□□□□ -2.13
ABCA4P78363 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.77□□□□□ -2.13
ABCA4P78363 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.77□□□□□ -2.13
ABCA4P78363 AL356575.1-201ENST00000603008 283 ntBASIC1.77□□□□□ -2.13
ABCA4P78363 AC011472.4-201ENST00000615848 491 ntBASIC1.77□□□□□ -2.13
ABCA4P78363 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.77□□□□□ -2.13
ABCA4P78363 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
ABCA4P78363 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ABCA4P78363 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.77□□□□□ -2.13
ABCA4P78363 MIR9-3-201ENST00000385084 90 ntBASIC1.77□□□□□ -2.13
ABCA4P78363 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
ABCA4P78363 AL591034.1-201ENST00000407447 340 ntBASIC1.77□□□□□ -2.13
ABCA4P78363 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.77□□□□□ -2.13
ABCA4P78363 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.77□□□□□ -2.13
ABCA4P78363 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.77□□□□□ -2.13
ABCA4P78363 CR769767.1-201ENST00000436337 346 ntBASIC1.77□□□□□ -2.13
ABCA4P78363 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.77□□□□□ -2.13
ABCA4P78363 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.77□□□□□ -2.13
ABCA4P78363 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.77□□□□□ -2.13
ABCA4P78363 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.77□□□□□ -2.13
ABCA4P78363 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.77□□□□□ -2.13
ABCA4P78363 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.77□□□□□ -2.13
ABCA4P78363 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.77□□□□□ -2.13
ABCA4P78363 SYF2P1-201ENST00000550658 413 ntBASIC1.77□□□□□ -2.13
ABCA4P78363 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.77□□□□□ -2.13
ABCA4P78363 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.77□□□□□ -2.13
ABCA4P78363 AL022099.1-201ENST00000604551 712 ntBASIC1.77□□□□□ -2.13
ABCA4P78363 AC027514.1-201ENST00000588561 1603 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 MTND5P28-201ENST00000438005 1594 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
ABCA4P78363 RNU6-392P-201ENST00000364926 101 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 AC004022.2-201ENST00000413824 193 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 ATP5F1P1-201ENST00000433775 569 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 SETP8-201ENST00000435341 628 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.76□□□□□ -2.13
ABCA4P78363 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.76□□□□□ -2.13
ABCA4P78363 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.76□□□□□ -2.13
ABCA4P78363 RPL7P54-201ENST00000438336 674 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 AL591719.1-201ENST00000444669 744 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 RPL31P53-201ENST00000457065 348 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
ABCA4P78363 AC090543.1-201ENST00000492168 485 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 AC005840.1-201ENST00000498412 377 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 SCARNA17.1-201ENST00000516211 143 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms