Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MRPS33P4-201ENST00000434892 317 ntBASIC1.91□□□□□ -2.1
UBA52P62987 RPS7P2-201ENST00000435134 607 ntBASIC1.91□□□□□ -2.1
UBA52P62987 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.91□□□□□ -2.1
UBA52P62987 AL121871.1-201ENST00000443413 436 ntBASIC1.91□□□□□ -2.1
UBA52P62987 AL035407.2-201ENST00000454090 378 ntBASIC1.91□□□□□ -2.1
UBA52P62987 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.91□□□□□ -2.1
UBA52P62987 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.91□□□□□ -2.1
UBA52P62987 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.91□□□□□ -2.1
UBA52P62987 RNU1-40P-201ENST00000516816 164 ntBASIC1.91□□□□□ -2.1
UBA52P62987 RNU1-97P-201ENST00000516872 164 ntBASIC1.91□□□□□ -2.1
UBA52P62987 RN7SKP277-201ENST00000516895 283 ntBASIC1.91□□□□□ -2.1
UBA52P62987 AP004371.1-201ENST00000525240 214 ntBASIC1.91□□□□□ -2.1
UBA52P62987 AC015712.3-201ENST00000559380 164 ntBASIC1.91□□□□□ -2.1
UBA52P62987 AC025281.1-201ENST00000567026 265 ntBASIC1.91□□□□□ -2.1
UBA52P62987 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.91□□□□□ -2.1
UBA52P62987 AC002984.1-201ENST00000591692 448 ntBASIC1.91□□□□□ -2.1
UBA52P62987 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.91□□□□□ -2.1
UBA52P62987 AL160394.1-201ENST00000624765 724 ntBASIC1.91□□□□□ -2.1
UBA52P62987 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.91□□□□□ -2.1
UBA52P62987 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.9□□□□□ -2.1
UBA52P62987 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.9□□□□□ -2.11
UBA52P62987 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.9□□□□□ -2.11
UBA52P62987 AC016717.2-201ENST00000609089 5141 ntBASIC1.9□□□□□ -2.11
UBA52P62987 SNORD114-1-201ENST00000362705 72 ntBASIC1.9□□□□□ -2.11
UBA52P62987 RNA5SP338-201ENST00000410495 85 ntBASIC1.9□□□□□ -2.11
UBA52P62987 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.11
UBA52P62987 AC073264.1-201ENST00000411508 416 ntBASIC1.9□□□□□ -2.11
UBA52P62987 AC107081.1-201ENST00000414975 361 ntBASIC1.9□□□□□ -2.11
UBA52P62987 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.9□□□□□ -2.11
UBA52P62987 HMGN2P3-201ENST00000433603 273 ntBASIC1.9□□□□□ -2.11
UBA52P62987 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
UBA52P62987 HMGN2P5-201ENST00000436882 273 ntBASIC1.9□□□□□ -2.11
UBA52P62987 AL157827.1-201ENST00000447622 132 ntBASIC1.9□□□□□ -2.11
UBA52P62987 TPMTP4-201ENST00000450749 678 ntBASIC1.9□□□□□ -2.11
UBA52P62987 RPL36AP51-201ENST00000487216 318 ntBASIC1.9□□□□□ -2.11
UBA52P62987 RPL23AP49-201ENST00000492925 468 ntBASIC1.9□□□□□ -2.11
UBA52P62987 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.9□□□□□ -2.11
UBA52P62987 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.9□□□□□ -2.11
UBA52P62987 AC026436.1-201ENST00000510537 270 ntBASIC1.9□□□□□ -2.11
UBA52P62987 RAC1P5-201ENST00000512182 576 ntBASIC1.9□□□□□ -2.11
UBA52P62987 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.9□□□□□ -2.11
UBA52P62987 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
UBA52P62987 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
UBA52P62987 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.9□□□□□ -2.11
UBA52P62987 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.9□□□□□ -2.11
UBA52P62987 U73023.1-201ENST00000603134 700 ntBASIC1.9□□□□□ -2.11
UBA52P62987 AC025754.2-201ENST00000606491 432 ntBASIC1.9□□□□□ -2.11
UBA52P62987 AC106028.5-201ENST00000610332 395 ntBASIC1.9□□□□□ -2.11
UBA52P62987 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.9□□□□□ -2.11
UBA52P62987 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
UBA52P62987 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.9□□□□□ -2.11
UBA52P62987 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.9□□□□□ -2.11
UBA52P62987 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
UBA52P62987 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
UBA52P62987 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
UBA52P62987 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.89□□□□□ -2.11
UBA52P62987 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
UBA52P62987 AC007342.9-201ENST00000623877 1385 ntBASIC1.89□□□□□ -2.11
UBA52P62987 ZNF519P1-201ENST00000449011 1626 ntBASIC1.89□□□□□ -2.11
UBA52P62987 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
UBA52P62987 MIR524-201ENST00000385242 87 ntBASIC1.89□□□□□ -2.11
UBA52P62987 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
UBA52P62987 MIR764-201ENST00000390811 85 ntBASIC1.89□□□□□ -2.11
UBA52P62987 RNU6-482P-201ENST00000391068 107 ntBASIC1.89□□□□□ -2.11
UBA52P62987 AL591416.1-201ENST00000404015 867 ntBASIC1.89□□□□□ -2.11
UBA52P62987 MTCYBP7-201ENST00000419540 1134 ntBASIC1.89□□□□□ -2.11
UBA52P62987 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.89□□□□□ -2.11
UBA52P62987 UBE2D3P2-201ENST00000424409 445 ntBASIC1.89□□□□□ -2.11
UBA52P62987 RABEPKP1-201ENST00000440529 1026 ntBASIC1.89□□□□□ -2.11
UBA52P62987 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.89□□□□□ -2.11
UBA52P62987 AL031183.1-201ENST00000457667 207 ntBASIC1.89□□□□□ -2.11
UBA52P62987 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.89□□□□□ -2.11
UBA52P62987 RNU7-27P-201ENST00000459281 62 ntBASIC1.89□□□□□ -2.11
UBA52P62987 AC025033.1-201ENST00000463883 194 ntBASIC1.89□□□□□ -2.11
UBA52P62987 RPL21P99-201ENST00000480369 423 ntBASIC1.89□□□□□ -2.11
UBA52P62987 AC109486.1-201ENST00000486833 374 ntBASIC1.89□□□□□ -2.11
UBA52P62987 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.89□□□□□ -2.11
UBA52P62987 RNA5SP471-201ENST00000516971 106 ntBASIC1.89□□□□□ -2.11
UBA52P62987 ERHP1-201ENST00000523006 310 ntBASIC1.89□□□□□ -2.11
UBA52P62987 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.89□□□□□ -2.11
UBA52P62987 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.89□□□□□ -2.11
UBA52P62987 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.89□□□□□ -2.11
UBA52P62987 OR11H5P-201ENST00000554039 926 ntBASIC1.89□□□□□ -2.11
UBA52P62987 AC026464.5-201ENST00000562497 722 ntBASIC1.89□□□□□ -2.11
UBA52P62987 AC012182.1-201ENST00000570133 895 ntBASIC1.89□□□□□ -2.11
UBA52P62987 NTAN1P1-201ENST00000603150 646 ntBASIC1.89□□□□□ -2.11
UBA52P62987 AL392112.1-201ENST00000605115 829 ntBASIC1.89□□□□□ -2.11
UBA52P62987 AL136981.2-201ENST00000617319 734 ntBASIC1.89□□□□□ -2.11
UBA52P62987 AC009159.1-201ENST00000618386 642 ntBASIC1.89□□□□□ -2.11
UBA52P62987 AC098657.3-201ENST00000620434 263 ntBASIC1.89□□□□□ -2.11
UBA52P62987 uc_338.20-201ENST00000621563 178 ntBASIC1.89□□□□□ -2.11
UBA52P62987 AC020923.1-201ENST00000624021 917 ntBASIC1.89□□□□□ -2.11
UBA52P62987 AC026634.1-201ENST00000634369 198 ntBASIC1.89□□□□□ -2.11
UBA52P62987 AC241585.2-209ENST00000638217 143 ntBASIC1.89□□□□□ -2.11
UBA52P62987 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
UBA52P62987 SET-203ENST00000372688 801 ntTSL 2 BASIC1.88□□□□□ -2.11
UBA52P62987 OR5H15-201ENST00000383696 930 ntBASIC1.88□□□□□ -2.11
UBA52P62987 AL513331.1-201ENST00000411908 397 ntBASIC1.88□□□□□ -2.11
UBA52P62987 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.88□□□□□ -2.11
UBA52P62987 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms