Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.45□□□□□ -2.18
RPS28P62857 MIR6726-201ENST00000613751 61 ntBASIC1.45□□□□□ -2.18
RPS28P62857 U4atac.1-201ENST00000618345 95 ntBASIC1.45□□□□□ -2.18
RPS28P62857 SNORA11.6-201ENST00000619030 128 ntBASIC1.45□□□□□ -2.18
RPS28P62857 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC1.45□□□□□ -2.18
RPS28P62857 U4.6-201ENST00000621618 127 ntBASIC1.45□□□□□ -2.18
RPS28P62857 AC112694.2-201ENST00000623697 768 ntBASIC1.45□□□□□ -2.18
RPS28P62857 AL161912.2-201ENST00000565707 3007 ntBASIC1.45□□□□□ -2.18
RPS28P62857 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
RPS28P62857 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
RPS28P62857 AC109315.1-201ENST00000584143 1347 ntBASIC1.44□□□□□ -2.18
RPS28P62857 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
RPS28P62857 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
RPS28P62857 RNU6-750P-201ENST00000390946 107 ntBASIC1.44□□□□□ -2.18
RPS28P62857 AL031985.1-201ENST00000392713 418 ntBASIC1.44□□□□□ -2.18
RPS28P62857 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
RPS28P62857 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC1.44□□□□□ -2.18
RPS28P62857 AL356421.1-201ENST00000403255 413 ntBASIC1.44□□□□□ -2.18
RPS28P62857 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC1.44□□□□□ -2.18
RPS28P62857 AC245052.5-201ENST00000416320 649 ntBASIC1.44□□□□□ -2.18
RPS28P62857 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC1.44□□□□□ -2.18
RPS28P62857 MICF-203ENST00000432679 129 ntBASIC1.44□□□□□ -2.18
RPS28P62857 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.44□□□□□ -2.18
RPS28P62857 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.44□□□□□ -2.18
RPS28P62857 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC1.44□□□□□ -2.18
RPS28P62857 RPS26P30-201ENST00000443431 335 ntBASIC1.44□□□□□ -2.18
RPS28P62857 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC1.44□□□□□ -2.18
RPS28P62857 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.44□□□□□ -2.18
RPS28P62857 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.44□□□□□ -2.18
RPS28P62857 AC080013.2-201ENST00000460866 323 ntBASIC1.44□□□□□ -2.18
RPS28P62857 AC025033.1-201ENST00000463883 194 ntBASIC1.44□□□□□ -2.18
RPS28P62857 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC1.44□□□□□ -2.18
RPS28P62857 RN7SL504P-201ENST00000494496 287 ntBASIC1.44□□□□□ -2.18
RPS28P62857 AC108693.1-201ENST00000496068 432 ntBASIC1.44□□□□□ -2.18
RPS28P62857 PRELID3BP6-201ENST00000503839 571 ntBASIC1.44□□□□□ -2.18
RPS28P62857 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC1.44□□□□□ -2.18
RPS28P62857 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC1.44□□□□□ -2.18
RPS28P62857 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.44□□□□□ -2.18
RPS28P62857 AP004607.5-201ENST00000532034 217 ntBASIC1.44□□□□□ -2.18
RPS28P62857 CR383656.7-201ENST00000548164 174 ntBASIC1.44□□□□□ -2.18
RPS28P62857 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.44□□□□□ -2.18
RPS28P62857 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.44□□□□□ -2.18
RPS28P62857 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.44□□□□□ -2.18
RPS28P62857 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.44□□□□□ -2.18
RPS28P62857 AC105245.1-201ENST00000581934 244 ntBASIC1.44□□□□□ -2.18
RPS28P62857 ZNF861P-201ENST00000588126 639 ntBASIC1.44□□□□□ -2.18
RPS28P62857 VN1R88P-201ENST00000596787 292 ntBASIC1.44□□□□□ -2.18
RPS28P62857 MTND4LP5-201ENST00000605152 292 ntBASIC1.44□□□□□ -2.18
RPS28P62857 MIR6806-201ENST00000622141 64 ntBASIC1.44□□□□□ -2.18
RPS28P62857 AP002791.1-201ENST00000623291 381 ntBASIC1.44□□□□□ -2.18
RPS28P62857 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.44□□□□□ -2.18
RPS28P62857 AP003400.5-201ENST00000624827 617 ntBASIC1.44□□□□□ -2.18
RPS28P62857 MKKS-204ENST00000639674 192 ntBASIC1.44□□□□□ -2.18
RPS28P62857 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
RPS28P62857 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
RPS28P62857 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
RPS28P62857 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
RPS28P62857 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.44□□□□□ -2.18
RPS28P62857 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.44□□□□□ -2.18
RPS28P62857 AL390862.1-201ENST00000635467 1469 ntBASIC1.43□□□□□ -2.18
RPS28P62857 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.43□□□□□ -2.18
RPS28P62857 GDI2P1-201ENST00000429312 1336 ntBASIC1.43□□□□□ -2.18
RPS28P62857 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RPS28P62857 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
RPS28P62857 AC073325.2-201ENST00000339545 159 ntBASIC1.43□□□□□ -2.18
RPS28P62857 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.43□□□□□ -2.18
RPS28P62857 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
RPS28P62857 SNORA9-201ENST00000384215 133 ntBASIC1.43□□□□□ -2.18
RPS28P62857 SNORA3.3-201ENST00000408712 125 ntBASIC1.43□□□□□ -2.18
RPS28P62857 MIR1275-201ENST00000408770 80 ntBASIC1.43□□□□□ -2.18
RPS28P62857 RNA5SP113-201ENST00000410486 84 ntBASIC1.43□□□□□ -2.18
RPS28P62857 RPS20P15-201ENST00000412792 311 ntBASIC1.43□□□□□ -2.18
RPS28P62857 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.43□□□□□ -2.18
RPS28P62857 VN1R36P-201ENST00000414936 291 ntBASIC1.43□□□□□ -2.18
RPS28P62857 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC1.43□□□□□ -2.18
RPS28P62857 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.43□□□□□ -2.18
RPS28P62857 UQCRBP1-201ENST00000421129 336 ntBASIC1.43□□□□□ -2.18
RPS28P62857 AL356387.2-201ENST00000422272 243 ntBASIC1.43□□□□□ -2.18
RPS28P62857 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC1.43□□□□□ -2.18
RPS28P62857 AL512637.2-201ENST00000431287 1256 ntBASIC1.43□□□□□ -2.18
RPS28P62857 HSPE1P21-201ENST00000438283 308 ntBASIC1.43□□□□□ -2.18
RPS28P62857 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC1.43□□□□□ -2.18
RPS28P62857 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
RPS28P62857 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RPS28P62857 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.43□□□□□ -2.18
RPS28P62857 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.43□□□□□ -2.18
RPS28P62857 AP1S2P1-201ENST00000457344 379 ntBASIC1.43□□□□□ -2.18
RPS28P62857 MTCO3P2-201ENST00000457365 171 ntBASIC1.43□□□□□ -2.18
RPS28P62857 RPL26P9-201ENST00000457466 433 ntBASIC1.43□□□□□ -2.18
RPS28P62857 AP001486.1-201ENST00000463339 476 ntBASIC1.43□□□□□ -2.18
RPS28P62857 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.43□□□□□ -2.18
RPS28P62857 AC096571.1-202ENST00000506634 735 ntBASIC1.43□□□□□ -2.18
RPS28P62857 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC1.43□□□□□ -2.18
RPS28P62857 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
RPS28P62857 RNA5SP356-201ENST00000515972 94 ntBASIC1.43□□□□□ -2.18
RPS28P62857 SNORD46.2-201ENST00000516021 102 ntBASIC1.43□□□□□ -2.18
RPS28P62857 AC116917.1-201ENST00000520558 305 ntBASIC1.43□□□□□ -2.18
RPS28P62857 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RPS28P62857 AC084824.1-201ENST00000550917 1005 ntBASIC1.43□□□□□ -2.18
RPS28P62857 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms