Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VBP1P61758 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
VBP1P61758 AC131280.1-202ENST00000624067 4211 ntBASIC2.18□□□□□ -2.06
VBP1P61758 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.18□□□□□ -2.06
VBP1P61758 MTCO1P12-201ENST00000414273 1543 ntBASIC2.18□□□□□ -2.06
VBP1P61758 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VBP1P61758 SNORA41-201ENST00000384675 132 ntBASIC2.18□□□□□ -2.06
VBP1P61758 AL158825.1-201ENST00000414735 521 ntBASIC2.18□□□□□ -2.06
VBP1P61758 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.18□□□□□ -2.06
VBP1P61758 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.18□□□□□ -2.06
VBP1P61758 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.18□□□□□ -2.06
VBP1P61758 Z85994.2-201ENST00000434327 452 ntBASIC2.18□□□□□ -2.06
VBP1P61758 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.18□□□□□ -2.06
VBP1P61758 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.18□□□□□ -2.06
VBP1P61758 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.18□□□□□ -2.06
VBP1P61758 AL714022.1-201ENST00000439897 151 ntBASIC2.18□□□□□ -2.06
VBP1P61758 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.18□□□□□ -2.06
VBP1P61758 AL591503.2-201ENST00000442314 1005 ntBASIC2.18□□□□□ -2.06
VBP1P61758 AC068135.1-201ENST00000446164 246 ntBASIC2.18□□□□□ -2.06
VBP1P61758 PSPHP1-201ENST00000450062 261 ntBASIC2.18□□□□□ -2.06
VBP1P61758 AC104073.1-201ENST00000451988 151 ntBASIC2.18□□□□□ -2.06
VBP1P61758 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.18□□□□□ -2.06
VBP1P61758 RPS20P24-201ENST00000457473 361 ntBASIC2.18□□□□□ -2.06
VBP1P61758 AC116337.2-201ENST00000477662 156 ntBASIC2.18□□□□□ -2.06
VBP1P61758 COL6A4P2-205ENST00000509855 506 ntBASIC2.18□□□□□ -2.06
VBP1P61758 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.18□□□□□ -2.06
VBP1P61758 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.18□□□□□ -2.06
VBP1P61758 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.18□□□□□ -2.06
VBP1P61758 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.18□□□□□ -2.06
VBP1P61758 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.18□□□□□ -2.06
VBP1P61758 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.18□□□□□ -2.06
VBP1P61758 AC006539.2-201ENST00000601729 572 ntBASIC2.18□□□□□ -2.06
VBP1P61758 AC124312.4-201ENST00000605533 310 ntBASIC2.18□□□□□ -2.06
VBP1P61758 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.18□□□□□ -2.06
VBP1P61758 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.18□□□□□ -2.06
VBP1P61758 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.18□□□□□ -2.06
VBP1P61758 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.18□□□□□ -2.06
VBP1P61758 CKAP2P1-201ENST00000555477 2049 ntBASIC2.18□□□□□ -2.06
VBP1P61758 KPNA2P1-201ENST00000458289 1591 ntBASIC2.18□□□□□ -2.06
VBP1P61758 AC097714.1-201ENST00000511272 1647 ntBASIC2.17□□□□□ -2.06
VBP1P61758 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.17□□□□□ -2.06
VBP1P61758 RNA5SP456-201ENST00000364002 114 ntBASIC2.17□□□□□ -2.06
VBP1P61758 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.17□□□□□ -2.06
VBP1P61758 RNU6-1151P-201ENST00000384684 107 ntBASIC2.17□□□□□ -2.06
VBP1P61758 MIR17-201ENST00000385012 84 ntBASIC2.17□□□□□ -2.06
VBP1P61758 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.17□□□□□ -2.06
VBP1P61758 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.17□□□□□ -2.06
VBP1P61758 ATP5F1P1-201ENST00000433775 569 ntBASIC2.17□□□□□ -2.06
VBP1P61758 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.17□□□□□ -2.06
VBP1P61758 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.17□□□□□ -2.06
VBP1P61758 OSTCP8-201ENST00000445117 448 ntBASIC2.17□□□□□ -2.06
VBP1P61758 AC009220.1-201ENST00000451614 275 ntBASIC2.17□□□□□ -2.06
VBP1P61758 AC015724.1-201ENST00000478577 156 ntBASIC2.17□□□□□ -2.06
VBP1P61758 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.17□□□□□ -2.06
VBP1P61758 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.17□□□□□ -2.06
VBP1P61758 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.17□□□□□ -2.06
VBP1P61758 TTC39CP1-201ENST00000512513 755 ntBASIC2.17□□□□□ -2.06
VBP1P61758 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.17□□□□□ -2.06
VBP1P61758 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.17□□□□□ -2.06
VBP1P61758 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.17□□□□□ -2.06
VBP1P61758 AC243972.3-201ENST00000539655 198 ntBASIC2.17□□□□□ -2.06
VBP1P61758 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.17□□□□□ -2.06
VBP1P61758 CYCSP39-201ENST00000565821 309 ntBASIC2.17□□□□□ -2.06
VBP1P61758 MIR3160-1-201ENST00000577972 85 ntBASIC2.17□□□□□ -2.06
VBP1P61758 AL355877.2-201ENST00000603670 358 ntBASIC2.17□□□□□ -2.06
VBP1P61758 AC018618.2-201ENST00000604770 446 ntBASIC2.17□□□□□ -2.06
VBP1P61758 AC079791.1-201ENST00000605356 973 ntBASIC2.17□□□□□ -2.06
VBP1P61758 MIR378J-201ENST00000611988 109 ntBASIC2.17□□□□□ -2.06
VBP1P61758 AC025016.1-201ENST00000616746 682 ntBASIC2.17□□□□□ -2.06
VBP1P61758 AL391597.1-201ENST00000618707 694 ntBASIC2.17□□□□□ -2.06
VBP1P61758 AC073308.1-201ENST00000623696 305 ntBASIC2.17□□□□□ -2.06
VBP1P61758 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.17□□□□□ -2.06
VBP1P61758 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
VBP1P61758 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
VBP1P61758 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
VBP1P61758 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.16□□□□□ -2.06
VBP1P61758 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VBP1P61758 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
VBP1P61758 SNORA46.1-201ENST00000391069 153 ntBASIC2.16□□□□□ -2.06
VBP1P61758 SNORA11C-201ENST00000408532 129 ntBASIC2.16□□□□□ -2.06
VBP1P61758 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.16□□□□□ -2.06
VBP1P61758 RNU6-420P-201ENST00000458780 107 ntBASIC2.16□□□□□ -2.06
VBP1P61758 AC107626.1-201ENST00000471084 183 ntBASIC2.16□□□□□ -2.06
VBP1P61758 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.16□□□□□ -2.06
VBP1P61758 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.16□□□□□ -2.06
VBP1P61758 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.16□□□□□ -2.06
VBP1P61758 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.16□□□□□ -2.06
VBP1P61758 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.16□□□□□ -2.06
VBP1P61758 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.16□□□□□ -2.06
VBP1P61758 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.16□□□□□ -2.06
VBP1P61758 VN1R74P-201ENST00000613259 503 ntBASIC2.16□□□□□ -2.06
VBP1P61758 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.16□□□□□ -2.06
VBP1P61758 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.16□□□□□ -2.06
VBP1P61758 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.16□□□□□ -2.06
VBP1P61758 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.16□□□□□ -2.06
VBP1P61758 AP003399.1-201ENST00000637534 361 ntBASIC2.16□□□□□ -2.06
VBP1P61758 AC017104.5-201ENST00000637647 639 ntBASIC2.16□□□□□ -2.06
VBP1P61758 MIR7515-201ENST00000637837 67 ntBASIC2.16□□□□□ -2.06
VBP1P61758 DDX10P1-201ENST00000448545 1933 ntBASIC2.16□□□□□ -2.06
VBP1P61758 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms