Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.77□□□□□ -2.13
CKS1BP61024 RNU6-1197P-201ENST00000391183 107 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 EEF1A1P41-201ENST00000414667 207 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 COTL1P1-201ENST00000422309 375 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.77□□□□□ -2.13
CKS1BP61024 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 MYL8P-204ENST00000431574 518 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 USP12PX-201ENST00000432383 1057 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 AL714022.1-201ENST00000439897 151 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC1.77□□□□□ -2.13
CKS1BP61024 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.77□□□□□ -2.13
CKS1BP61024 RPL37P4-201ENST00000448908 268 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.77□□□□□ -2.13
CKS1BP61024 AC116337.2-201ENST00000477662 156 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.77□□□□□ -2.13
CKS1BP61024 AL358832.1-201ENST00000497800 389 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.77□□□□□ -2.13
CKS1BP61024 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 AC083923.1-201ENST00000523708 376 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.77□□□□□ -2.13
CKS1BP61024 AC022080.3-201ENST00000544433 482 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC1.77□□□□□ -2.13
CKS1BP61024 AL096840.1-201ENST00000603287 93 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 AP002826.1-201ENST00000608835 315 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 AC073968.1-201ENST00000618594 637 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 AC091932.3-201ENST00000624223 323 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 MIR3651-201ENST00000630427 90 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.77□□□□□ -2.13
CKS1BP61024 AC068620.4-201ENST00000636730 1182 ntBASIC1.77□□□□□ -2.13
CKS1BP61024 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
CKS1BP61024 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CKS1BP61024 RNU1-140P-201ENST00000365040 165 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 RNA5SP37-201ENST00000365420 130 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 RNVU1-14-201ENST00000384770 164 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 MIR34B-201ENST00000385076 84 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 MTND4LP20-201ENST00000402379 270 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 RPS3AP24-201ENST00000407896 734 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 RNA5SP80-201ENST00000410475 111 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.76□□□□□ -2.13
CKS1BP61024 YME1L1P1-201ENST00000429435 297 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 AC087499.2-201ENST00000432861 149 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.76□□□□□ -2.13
CKS1BP61024 XKRY2-201ENST00000442362 1093 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.76□□□□□ -2.13
CKS1BP61024 MTATP6P7-201ENST00000453315 681 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.76□□□□□ -2.13
CKS1BP61024 MTND4LP3-201ENST00000468320 276 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.76□□□□□ -2.13
CKS1BP61024 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC1.76□□□□□ -2.13
CKS1BP61024 XKRY-201ENST00000510392 1100 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 SNORA67.7-201ENST00000516664 135 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 RNU7-193P-201ENST00000516723 65 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 HMGB1P23-201ENST00000518743 568 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.76□□□□□ -2.13
CKS1BP61024 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.76□□□□□ -2.13
CKS1BP61024 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.76□□□□□ -2.13
CKS1BP61024 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.76□□□□□ -2.13
CKS1BP61024 OR4K7P-201ENST00000580232 945 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 uc_338.20-201ENST00000621563 178 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 MIR7515-201ENST00000637837 67 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 AP000553.5-201ENST00000641933 54 ntBASIC1.76□□□□□ -2.13
CKS1BP61024 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
CKS1BP61024 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CKS1BP61024 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.75□□□□□ -2.13
CKS1BP61024 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CKS1BP61024 AL138827.1-201ENST00000402666 306 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 CIR1P3-201ENST00000405137 479 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.75□□□□□ -2.13
CKS1BP61024 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
CKS1BP61024 RPL35AP12-201ENST00000425362 338 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 AL512649.1-201ENST00000428997 581 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 AC090774.1-201ENST00000435925 246 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC1.75□□□□□ -2.13
CKS1BP61024 AC004865.1-201ENST00000442276 1003 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 AL513328.1-201ENST00000446460 224 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.75□□□□□ -2.13
CKS1BP61024 AC092155.2-201ENST00000454675 477 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 AC008280.2-201ENST00000455473 307 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 SNORA84-201ENST00000459229 133 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 AP001992.1-205ENST00000462248 379 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 FAM133DP-201ENST00000464802 691 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.75□□□□□ -2.13
CKS1BP61024 AC023141.11-201ENST00000508864 202 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 RNU6-488P-201ENST00000515918 99 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 RNA5SP364-201ENST00000516938 78 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 AP005902.1-201ENST00000521358 186 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 C1DP5-201ENST00000525775 383 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.75□□□□□ -2.13
CKS1BP61024 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.75□□□□□ -2.13
CKS1BP61024 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.75□□□□□ -2.13
CKS1BP61024 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.75□□□□□ -2.13
CKS1BP61024 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
CKS1BP61024 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.75□□□□□ -2.13
CKS1BP61024 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.75□□□□□ -2.13
CKS1BP61024 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CKS1BP61024 TAB3P1-202ENST00000452645 1634 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms