Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTP1P59025 AP000907.2-201ENST00000530827 353 ntBASIC5.1□□□□□ -1.59
RTP1P59025 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.1□□□□□ -1.59
RTP1P59025 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.1□□□□□ -1.59
RTP1P59025 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.1□□□□□ -1.59
RTP1P59025 AC015912.2-201ENST00000571053 181 ntBASIC5.1□□□□□ -1.59
RTP1P59025 MIR4444-1-201ENST00000581696 74 ntBASIC5.1□□□□□ -1.59
RTP1P59025 MIR4444-2-201ENST00000584390 74 ntBASIC5.1□□□□□ -1.59
RTP1P59025 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.1□□□□□ -1.59
RTP1P59025 AL355816.1-201ENST00000607951 118 ntBASIC5.1□□□□□ -1.59
RTP1P59025 AC009318.4-201ENST00000620496 486 ntBASIC5.1□□□□□ -1.59
RTP1P59025 AC079597.1-201ENST00000624306 508 ntBASIC5.1□□□□□ -1.59
RTP1P59025 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTP1P59025 AP001273.1-201ENST00000624493 3152 ntBASIC5.1□□□□□ -1.59
RTP1P59025 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTP1P59025 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RTP1P59025 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.09□□□□□ -1.59
RTP1P59025 Z95331.1-201ENST00000623075 23112 ntBASIC5.09□□□□□ -1.59
RTP1P59025 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RTP1P59025 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
RTP1P59025 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RTP1P59025 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RTP1P59025 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.09□□□□□ -1.59
RTP1P59025 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RTP1P59025 AC005332.5-201ENST00000591222 2919 ntBASIC5.09□□□□□ -1.59
RTP1P59025 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RTP1P59025 RNU6-28P-201ENST00000362378 107 ntBASIC5.09□□□□□ -1.59
RTP1P59025 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
RTP1P59025 RNU6-831P-201ENST00000384548 107 ntBASIC5.09□□□□□ -1.59
RTP1P59025 MIR554-201ENST00000384874 96 ntBASIC5.09□□□□□ -1.59
RTP1P59025 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RTP1P59025 RNA5SP44-201ENST00000410446 133 ntBASIC5.09□□□□□ -1.59
RTP1P59025 AL356276.2-201ENST00000435919 558 ntBASIC5.09□□□□□ -1.59
RTP1P59025 AL138799.3-201ENST00000438968 350 ntBASIC5.09□□□□□ -1.59
RTP1P59025 RPS26P2-201ENST00000440331 348 ntBASIC5.09□□□□□ -1.59
RTP1P59025 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.09□□□□□ -1.59
RTP1P59025 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RTP1P59025 TRBV26-201ENST00000456572 344 ntBASIC5.09□□□□□ -1.59
RTP1P59025 GMFBP1-201ENST00000467831 427 ntBASIC5.09□□□□□ -1.59
RTP1P59025 AC006512.1-201ENST00000468816 291 ntBASIC5.09□□□□□ -1.59
RTP1P59025 RN7SL132P-201ENST00000478131 296 ntBASIC5.09□□□□□ -1.59
RTP1P59025 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.09□□□□□ -1.59
RTP1P59025 HSPD1P15-201ENST00000505573 1122 ntBASIC5.09□□□□□ -1.59
RTP1P59025 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.09□□□□□ -1.59
RTP1P59025 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.09□□□□□ -1.59
RTP1P59025 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RTP1P59025 RNU6-347P-201ENST00000516658 105 ntBASIC5.09□□□□□ -1.59
RTP1P59025 RNU1-45P-201ENST00000517191 141 ntBASIC5.09□□□□□ -1.59
RTP1P59025 AC018442.3-201ENST00000523025 183 ntBASIC5.09□□□□□ -1.59
RTP1P59025 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.09□□□□□ -1.59
RTP1P59025 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.09□□□□□ -1.59
RTP1P59025 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.09□□□□□ -1.59
RTP1P59025 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.09□□□□□ -1.59
RTP1P59025 RNU6-89P-201ENST00000606519 100 ntBASIC5.09□□□□□ -1.59
RTP1P59025 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.09□□□□□ -1.59
RTP1P59025 AC112200.1-201ENST00000625015 234 ntBASIC5.09□□□□□ -1.59
RTP1P59025 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.09□□□□□ -1.59
RTP1P59025 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.09□□□□□ -1.59
RTP1P59025 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
RTP1P59025 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RTP1P59025 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.09□□□□□ -1.59
RTP1P59025 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RTP1P59025 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.09□□□□□ -1.59
RTP1P59025 OR51H2P-202ENST00000641424 3046 ntBASIC5.09□□□□□ -1.6
RTP1P59025 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
RTP1P59025 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTP1P59025 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.08□□□□□ -1.6
RTP1P59025 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.08□□□□□ -1.6
RTP1P59025 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTP1P59025 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTP1P59025 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTP1P59025 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTP1P59025 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTP1P59025 Y_RNA.202-201ENST00000364083 110 ntBASIC5.08□□□□□ -1.6
RTP1P59025 Y_RNA.231-201ENST00000364358 102 ntBASIC5.08□□□□□ -1.6
RTP1P59025 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTP1P59025 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTP1P59025 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RTP1P59025 MIR921-201ENST00000401133 56 ntBASIC5.08□□□□□ -1.6
RTP1P59025 RPL5P18-201ENST00000406671 891 ntBASIC5.08□□□□□ -1.6
RTP1P59025 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.08□□□□□ -1.6
RTP1P59025 AL451054.2-201ENST00000420896 202 ntBASIC5.08□□□□□ -1.6
RTP1P59025 AC012065.2-201ENST00000421295 375 ntBASIC5.08□□□□□ -1.6
RTP1P59025 AC096632.1-201ENST00000427395 310 ntBASIC5.08□□□□□ -1.6
RTP1P59025 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.08□□□□□ -1.6
RTP1P59025 ERLEC1P1-201ENST00000433806 578 ntBASIC5.08□□□□□ -1.6
RTP1P59025 AL358232.1-201ENST00000448030 501 ntBASIC5.08□□□□□ -1.6
RTP1P59025 Y_RNA.631-201ENST00000459607 101 ntBASIC5.08□□□□□ -1.6
RTP1P59025 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.08□□□□□ -1.6
RTP1P59025 AC027575.1-201ENST00000481064 460 ntBASIC5.08□□□□□ -1.6
RTP1P59025 RPL23AP41-201ENST00000484754 458 ntBASIC5.08□□□□□ -1.6
RTP1P59025 AC055855.1-201ENST00000489563 579 ntBASIC5.08□□□□□ -1.6
RTP1P59025 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.08□□□□□ -1.6
RTP1P59025 KLHL2P1-201ENST00000508691 521 ntBASIC5.08□□□□□ -1.6
RTP1P59025 AC021146.1-201ENST00000511202 716 ntBASIC5.08□□□□□ -1.6
RTP1P59025 NARSP2-201ENST00000518524 679 ntBASIC5.08□□□□□ -1.6
RTP1P59025 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.08□□□□□ -1.6
RTP1P59025 AP003497.1-201ENST00000528472 562 ntBASIC5.08□□□□□ -1.6
RTP1P59025 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTP1P59025 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms