Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.87□□□□□ -1.95
PKNOX1P55347 MIR5004-201ENST00000579078 107 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 MIR4637-201ENST00000582405 84 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.87□□□□□ -1.95
PKNOX1P55347 AC245389.1-201ENST00000605141 529 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.87□□□□□ -1.95
PKNOX1P55347 AL138478.1-201ENST00000612252 832 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 PART1_2.1-201ENST00000612397 250 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 AC104763.3-201ENST00000613765 618 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PKNOX1P55347 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.87□□□□□ -1.95
PKNOX1P55347 CDR1-202ENST00000625883 1485 ntBASIC2.87□□□□□ -1.95
PKNOX1P55347 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.87□□□□□ -1.95
PKNOX1P55347 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
PKNOX1P55347 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PKNOX1P55347 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.87□□□□□ -1.95
PKNOX1P55347 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PKNOX1P55347 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PKNOX1P55347 SNORA54-201ENST00000384281 123 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 MIR181A2-201ENST00000384863 110 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 DHFRP6-201ENST00000401776 268 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 RNU2-47P-201ENST00000410649 186 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 RPL7P8-201ENST00000411964 730 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AC007742.1-201ENST00000425789 329 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.86□□□□□ -1.95
PKNOX1P55347 ELOCP26-201ENST00000436067 329 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.86□□□□□ -1.95
PKNOX1P55347 RPL23AP74-201ENST00000437246 471 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.86□□□□□ -1.95
PKNOX1P55347 MTND2P20-201ENST00000440805 661 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.86□□□□□ -1.95
PKNOX1P55347 AL358794.1-201ENST00000445689 381 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 RPL23AP31-201ENST00000456160 467 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.86□□□□□ -1.95
PKNOX1P55347 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.86□□□□□ -1.95
PKNOX1P55347 MLLT10P2-201ENST00000506434 249 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 HMGB1P28-201ENST00000507778 552 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.86□□□□□ -1.95
PKNOX1P55347 SLC2A13P1-201ENST00000531560 322 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AC024224.1-201ENST00000538284 609 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AC107016.2-201ENST00000547968 190 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.86□□□□□ -1.95
PKNOX1P55347 HSPE1P3-201ENST00000559254 309 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.86□□□□□ -1.95
PKNOX1P55347 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.86□□□□□ -1.95
PKNOX1P55347 AC008739.3-201ENST00000603262 127 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AL158050.2-201ENST00000605336 568 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AC025588.4-201ENST00000615802 908 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.86□□□□□ -1.95
PKNOX1P55347 AC002076.2-201ENST00000617362 122 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.86□□□□□ -1.95
PKNOX1P55347 AC009269.6-201ENST00000621778 588 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AC004009.2-201ENST00000623016 728 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AL356585.4-201ENST00000623078 1229 ntBASIC2.86□□□□□ -1.95
PKNOX1P55347 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.86□□□□□ -1.95
PKNOX1P55347 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PKNOX1P55347 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.86□□□□□ -1.95
PKNOX1P55347 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.85□□□□□ -1.95
PKNOX1P55347 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PKNOX1P55347 RNU1-35P-201ENST00000362782 153 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 RNA5SP72-201ENST00000364442 117 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 SNORD116-12-201ENST00000384468 92 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 ATP5F1P3-201ENST00000397213 657 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 SNORD88.1-201ENST00000408684 91 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.85□□□□□ -1.95
PKNOX1P55347 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.85□□□□□ -1.95
PKNOX1P55347 AL158156.1-201ENST00000422509 473 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PKNOX1P55347 AL590233.1-201ENST00000430017 456 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 NANOGP2-201ENST00000435391 727 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PKNOX1P55347 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.85□□□□□ -1.95
PKNOX1P55347 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
PKNOX1P55347 AL162389.1-201ENST00000449233 177 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 OFD1P3Y-201ENST00000453312 783 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 SUMO2P2-201ENST00000456482 255 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 FCF1P6-201ENST00000456841 595 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 MTND2P39-201ENST00000457230 764 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 SNORA84-201ENST00000459229 133 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.85□□□□□ -1.95
PKNOX1P55347 OR2A20P-203ENST00000498397 1268 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.85□□□□□ -1.95
PKNOX1P55347 COX7A2P2-201ENST00000505291 250 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 HSPD1P15-201ENST00000505573 1122 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.85□□□□□ -1.95
PKNOX1P55347 FAM60DP-201ENST00000524174 632 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 AC022690.1-201ENST00000526681 550 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.85□□□□□ -1.95
PKNOX1P55347 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.85□□□□□ -1.95
PKNOX1P55347 TMF1P1-201ENST00000576058 373 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 AC053481.3-201ENST00000577881 843 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 COX6CP3-201ENST00000580869 223 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 AC015688.2-201ENST00000584523 262 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 AC023043.3-201ENST00000593113 385 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.85□□□□□ -1.95
PKNOX1P55347 AL121652.1-201ENST00000608851 448 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 AC090115.4-201ENST00000609970 188 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.85□□□□□ -1.95
PKNOX1P55347 LINC02211-204ENST00000642024 1070 ntBASIC2.85□□□□□ -1.95
PKNOX1P55347 MTND4P9-201ENST00000507819 1346 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms