Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MTND1P23-201ENST00000416931 372 ntBASIC2.09□□□□□ -2.07
SRP9P49458 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.09□□□□□ -2.07
SRP9P49458 WARS2P1-201ENST00000429678 537 ntBASIC2.09□□□□□ -2.07
SRP9P49458 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.09□□□□□ -2.07
SRP9P49458 OR6C71P-201ENST00000432580 913 ntBASIC2.09□□□□□ -2.07
SRP9P49458 AL392003.1-201ENST00000434394 243 ntBASIC2.09□□□□□ -2.07
SRP9P49458 RNF2P1-201ENST00000442955 1010 ntBASIC2.09□□□□□ -2.07
SRP9P49458 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.09□□□□□ -2.07
SRP9P49458 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.09□□□□□ -2.07
SRP9P49458 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.09□□□□□ -2.07
SRP9P49458 RPS3P1-201ENST00000456781 192 ntBASIC2.09□□□□□ -2.07
SRP9P49458 NAP1L1P3-201ENST00000462291 880 ntBASIC2.09□□□□□ -2.07
SRP9P49458 AC078857.1-201ENST00000469870 667 ntBASIC2.09□□□□□ -2.07
SRP9P49458 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.09□□□□□ -2.07
SRP9P49458 GTF2IP9-201ENST00000502460 301 ntBASIC2.09□□□□□ -2.07
SRP9P49458 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.09□□□□□ -2.07
SRP9P49458 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.09□□□□□ -2.07
SRP9P49458 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.09□□□□□ -2.07
SRP9P49458 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.09□□□□□ -2.07
SRP9P49458 COX6B1P6-201ENST00000522347 255 ntBASIC2.09□□□□□ -2.07
SRP9P49458 AP001646.1-201ENST00000527936 915 ntBASIC2.09□□□□□ -2.07
SRP9P49458 SNRPGP16-201ENST00000533275 226 ntBASIC2.09□□□□□ -2.07
SRP9P49458 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SRP9P49458 AC023158.1-201ENST00000561632 1025 ntBASIC2.09□□□□□ -2.07
SRP9P49458 AP005205.1-201ENST00000563503 508 ntBASIC2.09□□□□□ -2.07
SRP9P49458 AC010546.1-201ENST00000569391 485 ntBASIC2.09□□□□□ -2.07
SRP9P49458 MIR3117-201ENST00000584034 78 ntBASIC2.09□□□□□ -2.07
SRP9P49458 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.09□□□□□ -2.07
SRP9P49458 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.09□□□□□ -2.07
SRP9P49458 HMGB1P24-202ENST00000615653 685 ntBASIC2.09□□□□□ -2.07
SRP9P49458 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.09□□□□□ -2.07
SRP9P49458 CTSLP2-204ENST00000629029 392 ntBASIC2.09□□□□□ -2.07
SRP9P49458 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SRP9P49458 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.09□□□□□ -2.08
SRP9P49458 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SRP9P49458 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
SRP9P49458 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SRP9P49458 UBE2V1P2-201ENST00000397758 440 ntBASIC2.08□□□□□ -2.08
SRP9P49458 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SRP9P49458 AL359511.1-201ENST00000402970 211 ntBASIC2.08□□□□□ -2.08
SRP9P49458 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.08□□□□□ -2.08
SRP9P49458 FNDC3CP-201ENST00000420795 1155 ntBASIC2.08□□□□□ -2.08
SRP9P49458 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.08□□□□□ -2.08
SRP9P49458 AL031659.1-201ENST00000447075 539 ntBASIC2.08□□□□□ -2.08
SRP9P49458 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.08□□□□□ -2.08
SRP9P49458 RN7SKP96-201ENST00000516948 297 ntBASIC2.08□□□□□ -2.08
SRP9P49458 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.08□□□□□ -2.08
SRP9P49458 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.08□□□□□ -2.08
SRP9P49458 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.08□□□□□ -2.08
SRP9P49458 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.08□□□□□ -2.08
SRP9P49458 AC009097.3-201ENST00000563557 1018 ntBASIC2.08□□□□□ -2.08
SRP9P49458 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.08□□□□□ -2.08
SRP9P49458 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.08□□□□□ -2.08
SRP9P49458 AC090751.1-201ENST00000566966 267 ntBASIC2.08□□□□□ -2.08
SRP9P49458 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.08□□□□□ -2.08
SRP9P49458 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.08□□□□□ -2.08
SRP9P49458 AL669831.4-202ENST00000590817 238 ntBASIC2.08□□□□□ -2.08
SRP9P49458 AC073111.2-201ENST00000605657 1075 ntBASIC2.08□□□□□ -2.08
SRP9P49458 AL161629.2-201ENST00000615347 275 ntBASIC2.08□□□□□ -2.08
SRP9P49458 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SRP9P49458 AL031601.2-202ENST00000622650 282 ntBASIC2.08□□□□□ -2.08
SRP9P49458 AC012640.5-201ENST00000623897 319 ntBASIC2.08□□□□□ -2.08
SRP9P49458 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.08□□□□□ -2.08
SRP9P49458 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.08□□□□□ -2.08
SRP9P49458 MTND4P35-201ENST00000604257 1375 ntBASIC2.08□□□□□ -2.08
SRP9P49458 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SRP9P49458 AC069528.2-201ENST00000624849 1991 ntBASIC2.07□□□□□ -2.08
SRP9P49458 RNA5SP258-201ENST00000362750 119 ntBASIC2.07□□□□□ -2.08
SRP9P49458 RNU6-301P-201ENST00000384277 107 ntBASIC2.07□□□□□ -2.08
SRP9P49458 AL355497.1-201ENST00000406262 551 ntBASIC2.07□□□□□ -2.08
SRP9P49458 RNA5SP56-201ENST00000410277 118 ntBASIC2.07□□□□□ -2.08
SRP9P49458 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.07□□□□□ -2.08
SRP9P49458 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.07□□□□□ -2.08
SRP9P49458 MTCO3P30-201ENST00000426425 670 ntBASIC2.07□□□□□ -2.08
SRP9P49458 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.07□□□□□ -2.08
SRP9P49458 AL160175.1-201ENST00000428124 247 ntBASIC2.07□□□□□ -2.08
SRP9P49458 FCF1P1-201ENST00000432690 571 ntBASIC2.07□□□□□ -2.08
SRP9P49458 ATP5F1P1-201ENST00000433775 569 ntBASIC2.07□□□□□ -2.08
SRP9P49458 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.07□□□□□ -2.08
SRP9P49458 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SRP9P49458 AC119751.5-201ENST00000514077 770 ntBASIC2.07□□□□□ -2.08
SRP9P49458 AC008494.2-201ENST00000514544 370 ntBASIC2.07□□□□□ -2.08
SRP9P49458 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.07□□□□□ -2.08
SRP9P49458 AC008562.1-201ENST00000521763 330 ntBASIC2.07□□□□□ -2.08
SRP9P49458 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.07□□□□□ -2.08
SRP9P49458 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.07□□□□□ -2.08
SRP9P49458 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.07□□□□□ -2.08
SRP9P49458 AC022069.1-201ENST00000582910 658 ntBASIC2.07□□□□□ -2.08
SRP9P49458 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.07□□□□□ -2.08
SRP9P49458 AC128687.1-201ENST00000605304 619 ntBASIC2.07□□□□□ -2.08
SRP9P49458 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.07□□□□□ -2.08
SRP9P49458 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
SRP9P49458 MIR6852-201ENST00000621699 66 ntBASIC2.07□□□□□ -2.08
SRP9P49458 AC025034.2-201ENST00000623264 286 ntBASIC2.07□□□□□ -2.08
SRP9P49458 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.07□□□□□ -2.08
SRP9P49458 AC080100.1-201ENST00000624239 5356 ntBASIC2.07□□□□□ -2.08
SRP9P49458 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.06□□□□□ -2.08
SRP9P49458 ANKRD36P1-201ENST00000344424 659 ntBASIC2.06□□□□□ -2.08
SRP9P49458 RNU6-386P-201ENST00000362650 107 ntBASIC2.06□□□□□ -2.08
SRP9P49458 MIR518C-201ENST00000384822 101 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms