Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CX3CR1P49238 RNU6-1197P-201ENST00000391183 107 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 AL355143.1-201ENST00000407101 841 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 AL450338.1-201ENST00000407987 512 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 SNORD88.1-201ENST00000408684 91 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.64□□□□□ -1.99
CX3CR1P49238 USP9YP21-201ENST00000420603 432 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.64□□□□□ -1.99
CX3CR1P49238 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.64□□□□□ -1.99
CX3CR1P49238 YWHAZP7-201ENST00000436906 631 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 LSM1P1-201ENST00000438629 273 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.64□□□□□ -1.99
CX3CR1P49238 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.64□□□□□ -1.99
CX3CR1P49238 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.64□□□□□ -1.99
CX3CR1P49238 AL672167.3-201ENST00000465951 960 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 AL049714.1-201ENST00000466686 347 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 RPS15AP17-201ENST00000470598 390 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 RPS26P21-201ENST00000475397 348 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CX3CR1P49238 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.64□□□□□ -1.99
CX3CR1P49238 DSTNP2-201ENST00000504533 515 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 HSPD1P15-201ENST00000505573 1122 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 AC109464.2-201ENST00000510242 943 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.64□□□□□ -1.99
CX3CR1P49238 SNORA19.3-201ENST00000516165 130 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 RNU6-56P-201ENST00000516986 93 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 SNORA31.26-201ENST00000517250 137 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.64□□□□□ -1.99
CX3CR1P49238 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.64□□□□□ -1.99
CX3CR1P49238 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.64□□□□□ -1.99
CX3CR1P49238 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.64□□□□□ -1.99
CX3CR1P49238 OR7K1P-201ENST00000546439 926 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 GTF2IP8-201ENST00000560687 584 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.64□□□□□ -1.99
CX3CR1P49238 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.64□□□□□ -1.99
CX3CR1P49238 DUXAP11-201ENST00000603858 526 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 AP002802.2-201ENST00000605877 235 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 AC005332.6-201ENST00000613178 446 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 MIR7112-201ENST00000616126 65 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 AL138955.1-201ENST00000622881 1040 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CX3CR1P49238 AC092435.3-201ENST00000565538 3654 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CX3CR1P49238 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.64□□□□□ -1.99
CX3CR1P49238 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
CX3CR1P49238 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CX3CR1P49238 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CX3CR1P49238 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CX3CR1P49238 RNA5SP267-201ENST00000364893 126 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 MIR670-201ENST00000390142 98 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CX3CR1P49238 RNA5SP120-201ENST00000410900 112 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 ATG3P1-201ENST00000419507 911 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.63□□□□□ -1.99
CX3CR1P49238 AL645937.1-202ENST00000421799 937 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 AL158156.1-201ENST00000422509 473 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.63□□□□□ -1.99
CX3CR1P49238 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.63□□□□□ -1.99
CX3CR1P49238 YME1L1P1-201ENST00000429435 297 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CX3CR1P49238 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.63□□□□□ -1.99
CX3CR1P49238 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.63□□□□□ -1.99
CX3CR1P49238 THAP5P1-201ENST00000439089 262 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 PTGES3P1-201ENST00000439531 483 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 MTCYBP42-201ENST00000444653 1130 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CX3CR1P49238 PNPLA4P1-201ENST00000458328 305 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 PRELID3BP6-201ENST00000503839 571 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 MTND3P3-201ENST00000505004 126 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.63□□□□□ -1.99
CX3CR1P49238 RAC1P5-201ENST00000512182 576 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CX3CR1P49238 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.63□□□□□ -1.99
CX3CR1P49238 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.63□□□□□ -1.99
CX3CR1P49238 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.63□□□□□ -1.99
CX3CR1P49238 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.63□□□□□ -1.99
CX3CR1P49238 MIR4637-201ENST00000582405 84 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 AC105224.1-201ENST00000587055 421 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.63□□□□□ -1.99
CX3CR1P49238 AC084757.4-201ENST00000616350 526 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 AC084824.4-201ENST00000620106 731 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 AC007318.2-201ENST00000620999 243 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 AC011330.2-201ENST00000621680 635 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 AC090772.4-201ENST00000623599 362 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CX3CR1P49238 OR5BR1P-201ENST00000524992 1330 ntBASIC2.63□□□□□ -1.99
CX3CR1P49238 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CX3CR1P49238 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CX3CR1P49238 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CX3CR1P49238 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CX3CR1P49238 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CX3CR1P49238 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CX3CR1P49238 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CX3CR1P49238 MIR22-201ENST00000362190 85 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 RNU6-216P-201ENST00000363282 104 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 RNU6-298P-201ENST00000390888 96 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 RPL5P18-201ENST00000406671 891 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 RNU2-42P-201ENST00000410697 113 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms