Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.62□□□□□ -1.99
CXCL12P48061 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.62□□□□□ -1.99
CXCL12P48061 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.62□□□□□ -1.99
CXCL12P48061 AC034268.2-201ENST00000571784 482 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 MIR3605-201ENST00000583214 100 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 SNORD39.3-201ENST00000584451 71 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 VN1R87P-201ENST00000596706 487 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.62□□□□□ -1.99
CXCL12P48061 AP000238.1-201ENST00000608759 426 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 AP005137.2-201ENST00000609238 400 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL12P48061 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL12P48061 AL512427.1-201ENST00000618593 349 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 Z99129.2-201ENST00000619967 314 ntBASIC2.62□□□□□ -1.99
CXCL12P48061 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CXCL12P48061 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CXCL12P48061 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CXCL12P48061 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.61□□□□□ -1.99
CXCL12P48061 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.61□□□□□ -1.99
CXCL12P48061 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CXCL12P48061 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CXCL12P48061 RNU6-600P-201ENST00000362524 99 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 RNU6-582P-201ENST00000362989 107 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 SNORA7.2-201ENST00000364446 145 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 SNORD116-23-201ENST00000384645 92 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 MIR649-201ENST00000384843 97 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CXCL12P48061 AL139098.1-201ENST00000407291 389 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.61□□□□□ -1.99
CXCL12P48061 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.61□□□□□ -1.99
CXCL12P48061 AC244098.2-201ENST00000422068 99 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.61□□□□□ -1.99
CXCL12P48061 MTCYBP32-201ENST00000427945 1084 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.61□□□□□ -1.99
CXCL12P48061 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.61□□□□□ -1.99
CXCL12P48061 ARF4P4-201ENST00000439608 520 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 NDUFA5P7-201ENST00000452914 242 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 AC244505.3-201ENST00000454598 187 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 snoU13.23-201ENST00000458863 104 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 RPL21P41-201ENST00000459863 264 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.61□□□□□ -1.99
CXCL12P48061 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.61□□□□□ -1.99
CXCL12P48061 AC026414.1-201ENST00000504046 698 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 KCTD9P5-201ENST00000504141 1170 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 MTCO3P44-201ENST00000510977 541 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 RNA5SP320-201ENST00000516263 124 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 RN7SKP282-201ENST00000516824 299 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.61□□□□□ -1.99
CXCL12P48061 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CXCL12P48061 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.61□□□□□ -1.99
CXCL12P48061 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.61□□□□□ -1.99
CXCL12P48061 AC122134.1-202ENST00000569111 1201 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CXCL12P48061 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.61□□□□□ -1.99
CXCL12P48061 AC025588.3-201ENST00000604182 274 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 AC124016.2-201ENST00000610058 665 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 AC007275.1-201ENST00000621243 671 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 AP002371.2-201ENST00000624450 503 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 AC080188.3-201ENST00000624842 748 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CXCL12P48061 AC103988.1-201ENST00000566382 2177 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 MTND5P7-201ENST00000413558 1798 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CXCL12P48061 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 ZNF37BP-203ENST00000452306 1352 ntBASIC2.61□□□□□ -1.99
CXCL12P48061 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.61□□□□□ -1.99
CXCL12P48061 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
CXCL12P48061 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.6□□□□□ -1.99
CXCL12P48061 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
CXCL12P48061 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.6□□□□□ -1.99
CXCL12P48061 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.6□□□□□ -1.99
CXCL12P48061 RNU6-263P-201ENST00000363811 107 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
CXCL12P48061 RPS7P13-201ENST00000413955 498 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 FCF1P2-201ENST00000415284 583 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 MTCYBP24-201ENST00000420387 1106 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 OFD1P18Y-201ENST00000420889 959 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.6□□□□□ -1.99
CXCL12P48061 AC092634.2-201ENST00000428146 1010 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 RPL31P54-201ENST00000429803 370 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 AL139415.2-201ENST00000431968 163 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 FCF1P1-201ENST00000432690 571 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 HIGD1AP2-201ENST00000446367 280 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CXCL12P48061 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CXCL12P48061 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.6□□□□□ -1.99
CXCL12P48061 AC104073.1-201ENST00000451988 151 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.6□□□□□ -1.99
CXCL12P48061 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
CXCL12P48061 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.6□□□□□ -1.99
CXCL12P48061 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
CXCL12P48061 MTCYBP37-201ENST00000510642 1133 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 RNA5SP135-201ENST00000517019 125 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 snoZ278.1-201ENST00000517059 112 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 AC023632.1-201ENST00000518463 375 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.6□□□□□ -1.99
CXCL12P48061 OR4A45P-201ENST00000529954 901 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.6□□□□□ -1.99
CXCL12P48061 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms