Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL049781.1-201ENST00000623195 3585 ntBASIC2.39□□□□□ -2.03
HLA-DMAP28067 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DMAP28067 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DMAP28067 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DMAP28067 OR5BR1P-201ENST00000524992 1330 ntBASIC2.39□□□□□ -2.03
HLA-DMAP28067 RNA5SP393-201ENST00000363423 117 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DMAP28067 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 RNU6-1197P-201ENST00000391183 107 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DMAP28067 AL136133.1-201ENST00000413694 376 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 AL365496.1-201ENST00000426885 215 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 AC005345.1-201ENST00000431868 217 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 AL513043.1-201ENST00000439124 535 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 AC044797.1-201ENST00000445744 679 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 RPL23AP70-201ENST00000483361 460 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 AC118282.2-201ENST00000508739 374 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 OR4R2P-201ENST00000530815 597 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 AC009163.5-201ENST00000575421 637 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 RPAP2P1-201ENST00000603626 1168 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 AC011890.2-201ENST00000613393 294 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 VN1R7P-201ENST00000619242 903 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 AC039056.2-201ENST00000622261 511 ntBASIC2.38□□□□□ -2.03
HLA-DMAP28067 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HLA-DMAP28067 SDAD1P2-201ENST00000441308 2028 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 SNORA54-201ENST00000384281 123 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 SNORA80E-201ENST00000384744 137 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 ANAPC10P1-201ENST00000395991 556 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 AC027644.1-201ENST00000419595 298 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 AL389915.1-201ENST00000422463 466 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 RPS12P2-201ENST00000439728 269 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 AC093156.1-201ENST00000440382 670 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 AC002542.1-201ENST00000440683 193 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 NDUFA5P7-201ENST00000452914 242 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 BTF3P5-201ENST00000457252 467 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 RPL27AP5-201ENST00000469428 449 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 RPS27P26-201ENST00000494583 239 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 RPL30P5-201ENST00000494923 336 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 MTCO3P27-201ENST00000514397 196 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 HMGB1P6-201ENST00000569046 646 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 MIR5680-201ENST00000577577 84 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 ZNF861P-201ENST00000588126 639 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 AC124312.4-201ENST00000605533 310 ntBASIC2.37□□□□□ -2.03
HLA-DMAP28067 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DMAP28067 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DMAP28067 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HLA-DMAP28067 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DMAP28067 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DMAP28067 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
HLA-DMAP28067 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DMAP28067 TAB3P1-202ENST00000452645 1634 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 SNORA71.1-201ENST00000364523 117 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 SNORA62.3-201ENST00000365110 153 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
HLA-DMAP28067 SNORA40.4-201ENST00000390971 128 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 AL603865.2-201ENST00000401679 213 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 AL139098.1-201ENST00000407291 389 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 MIR1290-201ENST00000408735 78 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DMAP28067 AC012497.1-201ENST00000429392 575 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 ARPC3P1-201ENST00000437218 533 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 MTCO3P2-201ENST00000457365 171 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 PNPLA4P1-201ENST00000458328 305 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 RPS4XP10-201ENST00000465034 731 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms