Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.77□□□□□ -1.65
HMGB1P09429 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMGB1P09429 CR383658.2-201ENST00000547576 1525 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 MAPK10-253ENST00000641010 4072 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGB1P09429 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.76□□□□□ -1.65
HMGB1P09429 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGB1P09429 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.76□□□□□ -1.65
HMGB1P09429 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGB1P09429 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HMGB1P09429 RNA5SP139-201ENST00000364340 117 ntBASIC4.76□□□□□ -1.65
HMGB1P09429 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGB1P09429 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.76□□□□□ -1.65
HMGB1P09429 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMGB1P09429 DPPA2P1-201ENST00000428060 556 ntBASIC4.76□□□□□ -1.65
HMGB1P09429 AC096638.2-201ENST00000434965 711 ntBASIC4.76□□□□□ -1.65
HMGB1P09429 VN1R40P-201ENST00000455196 941 ntBASIC4.76□□□□□ -1.65
HMGB1P09429 AC010618.1-201ENST00000469924 477 ntBASIC4.76□□□□□ -1.65
HMGB1P09429 AC139783.2-201ENST00000504847 1145 ntBASIC4.76□□□□□ -1.65
HMGB1P09429 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGB1P09429 RNU6-64P-201ENST00000517119 105 ntBASIC4.76□□□□□ -1.65
HMGB1P09429 MRPL49P2-201ENST00000521066 465 ntBASIC4.76□□□□□ -1.65
HMGB1P09429 AC093331.1-201ENST00000521474 169 ntBASIC4.76□□□□□ -1.65
HMGB1P09429 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGB1P09429 AC091516.1-201ENST00000549191 703 ntBASIC4.76□□□□□ -1.65
HMGB1P09429 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.76□□□□□ -1.65
HMGB1P09429 MIR3939-201ENST00000582614 106 ntBASIC4.76□□□□□ -1.65
HMGB1P09429 AL606834.2-201ENST00000602954 668 ntBASIC4.76□□□□□ -1.65
HMGB1P09429 AC090970.3-201ENST00000612566 866 ntBASIC4.76□□□□□ -1.65
HMGB1P09429 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGB1P09429 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGB1P09429 AC008993.2-201ENST00000631744 806 ntBASIC4.76□□□□□ -1.65
HMGB1P09429 MTND1P37-201ENST00000636562 264 ntBASIC4.76□□□□□ -1.65
HMGB1P09429 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.76□□□□□ -1.65
HMGB1P09429 ZNF833P-201ENST00000424938 1494 ntBASIC4.75□□□□□ -1.65
HMGB1P09429 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGB1P09429 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
HMGB1P09429 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGB1P09429 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGB1P09429 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGB1P09429 RNU6-809P-201ENST00000384461 107 ntBASIC4.75□□□□□ -1.65
HMGB1P09429 RNU2-33P-201ENST00000410344 192 ntBASIC4.75□□□□□ -1.65
HMGB1P09429 AC078974.1-201ENST00000411597 223 ntBASIC4.75□□□□□ -1.65
HMGB1P09429 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGB1P09429 RPS27AP14-201ENST00000422868 454 ntBASIC4.75□□□□□ -1.65
HMGB1P09429 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGB1P09429 ZNF863P-201ENST00000426746 417 ntBASIC4.75□□□□□ -1.65
HMGB1P09429 ATP5HP2-201ENST00000433885 485 ntBASIC4.75□□□□□ -1.65
HMGB1P09429 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGB1P09429 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGB1P09429 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HMGB1P09429 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGB1P09429 MTND5P13-201ENST00000513046 1079 ntBASIC4.75□□□□□ -1.65
HMGB1P09429 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGB1P09429 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGB1P09429 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGB1P09429 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGB1P09429 AC007954.1-201ENST00000554198 494 ntBASIC4.75□□□□□ -1.65
HMGB1P09429 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGB1P09429 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGB1P09429 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGB1P09429 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.75□□□□□ -1.65
HMGB1P09429 AC022146.1-201ENST00000595307 847 ntBASIC4.75□□□□□ -1.65
HMGB1P09429 AP001981.2-201ENST00000603241 418 ntBASIC4.75□□□□□ -1.65
HMGB1P09429 DPPA3P3-201ENST00000603842 430 ntBASIC4.75□□□□□ -1.65
HMGB1P09429 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.75□□□□□ -1.65
HMGB1P09429 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HMGB1P09429 MAPK10-362ENST00000641864 4484 ntBASIC4.75□□□□□ -1.65
HMGB1P09429 AC091564.4-201ENST00000533934 2194 ntBASIC4.75□□□□□ -1.65
HMGB1P09429 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGB1P09429 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGB1P09429 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGB1P09429 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.75□□□□□ -1.65
HMGB1P09429 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGB1P09429 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
HMGB1P09429 HSPA8P1-201ENST00000425843 1833 ntBASIC4.74□□□□□ -1.65
HMGB1P09429 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HMGB1P09429 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HMGB1P09429 RNY4P24-201ENST00000362735 96 ntBASIC4.74□□□□□ -1.65
HMGB1P09429 RNU5A-8P-201ENST00000364102 114 ntBASIC4.74□□□□□ -1.65
HMGB1P09429 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HMGB1P09429 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HMGB1P09429 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.74□□□□□ -1.65
HMGB1P09429 AC092047.1-201ENST00000424997 240 ntBASIC4.74□□□□□ -1.65
HMGB1P09429 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.74□□□□□ -1.65
HMGB1P09429 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.74□□□□□ -1.65
HMGB1P09429 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.74□□□□□ -1.65
HMGB1P09429 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.74□□□□□ -1.65
HMGB1P09429 RPL37P21-201ENST00000435890 276 ntBASIC4.74□□□□□ -1.65
HMGB1P09429 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.74□□□□□ -1.65
HMGB1P09429 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.74□□□□□ -1.65
HMGB1P09429 AC108059.3-201ENST00000456388 214 ntBASIC4.74□□□□□ -1.65
HMGB1P09429 RN7SL860P-201ENST00000473738 223 ntBASIC4.74□□□□□ -1.65
HMGB1P09429 AC068587.2-201ENST00000478386 781 ntBASIC4.74□□□□□ -1.65
HMGB1P09429 RPS26P15-201ENST00000488067 348 ntBASIC4.74□□□□□ -1.65
HMGB1P09429 AC138853.1-201ENST00000503549 823 ntBASIC4.74□□□□□ -1.65
HMGB1P09429 ATP5F1P5-201ENST00000526403 760 ntBASIC4.74□□□□□ -1.65
HMGB1P09429 MTND4LP18-201ENST00000526864 291 ntBASIC4.74□□□□□ -1.65
HMGB1P09429 DEFB108A-201ENST00000530110 222 ntBASIC4.74□□□□□ -1.65
HMGB1P09429 AC020914.4-201ENST00000597690 277 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms