Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 HMGN1P12-201ENST00000499125 195 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 MTCYBP18-201ENST00000501056 747 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 UBE2CP3-201ENST00000502715 450 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 KCTD9P5-201ENST00000504141 1170 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 AC026403.1-201ENST00000518938 295 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 AC109635.3-201ENST00000529536 185 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 AC107954.1-201ENST00000565906 727 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 NF1P5-201ENST00000588287 448 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 AC060780.3-201ENST00000589464 80 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 TPMTP1-201ENST00000592307 737 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 CKS1BP3-201ENST00000600888 237 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 AC116447.1-201ENST00000613153 453 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 AC010338.1-201ENST00000621823 717 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 AL034408.1-202ENST00000636088 415 ntBASIC4.55□□□□□ -1.68
HLA-DOAP06340 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DOAP06340 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DOAP06340 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
HLA-DOAP06340 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DOAP06340 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DOAP06340 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HLA-DOAP06340 GNG5P1-201ENST00000255500 204 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOAP06340 Y_RNA.11-201ENST00000362375 109 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 SNORA71.3-201ENST00000362582 128 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 AL023807.1-201ENST00000407932 359 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 MIR1305-201ENST00000408300 86 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 TPMTP2-201ENST00000414372 726 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DOAP06340 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DOAP06340 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DOAP06340 MTCO2P11-201ENST00000431069 680 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.54□□□□□ -1.68
HLA-DOAP06340 AC104850.1-201ENST00000435940 476 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DOAP06340 AP000542.1-201ENST00000448473 371 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DOAP06340 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DOAP06340 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DOAP06340 AP000852.1-201ENST00000472460 573 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 AC018710.1-201ENST00000506509 158 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 Y_RNA.672-201ENST00000516289 104 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DOAP06340 ZNF705CP-201ENST00000530515 889 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOAP06340 AC123904.3-201ENST00000547218 814 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 HSPE1P3-201ENST00000559254 309 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.54□□□□□ -1.68
HLA-DOAP06340 MIR5187-201ENST00000583479 76 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 AC055876.5-201ENST00000605667 259 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 AC011816.2-201ENST00000607089 556 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 AL359697.1-201ENST00000624879 587 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 MIR1321-201ENST00000637766 79 ntBASIC4.54□□□□□ -1.68
HLA-DOAP06340 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DOAP06340 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOAP06340 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DOAP06340 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOAP06340 MAPK10-349ENST00000641767 3661 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 AC083843.3-201ENST00000623679 2186 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 LINC02471-203ENST00000641941 4752 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DOAP06340 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 HMGB1P17-201ENST00000403495 628 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 RNA5SP146-201ENST00000410743 123 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 RPL22P17-201ENST00000438729 315 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 MTND4LP16-201ENST00000440828 295 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 MTND1P11-201ENST00000456661 876 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 snoU13.7-201ENST00000459220 104 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 RPL7L1P8-201ENST00000469911 741 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 AC087879.1-201ENST00000474343 374 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 AP000893.1-201ENST00000474462 794 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 AC114786.4-201ENST00000508771 728 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 Y_RNA.693-201ENST00000516641 110 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 LSM6P2-201ENST00000552208 177 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 AC025678.1-201ENST00000567861 338 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 AP001330.5-201ENST00000607176 411 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 AL391813.2-201ENST00000609113 322 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms