Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.67□□□□□ -2.14
SPTA1P02549 HIGD1AP11-201ENST00000438361 280 ntBASIC1.67□□□□□ -2.14
SPTA1P02549 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.67□□□□□ -2.14
SPTA1P02549 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.67□□□□□ -2.14
SPTA1P02549 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.67□□□□□ -2.14
SPTA1P02549 MIR5089-201ENST00000580047 84 ntBASIC1.67□□□□□ -2.14
SPTA1P02549 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.67□□□□□ -2.14
SPTA1P02549 MED6P1-201ENST00000439659 713 ntBASIC1.67□□□□□ -2.14
SPTA1P02549 AC017099.1-201ENST00000448261 1028 ntBASIC1.67□□□□□ -2.14
SPTA1P02549 CDC42P1-201ENST00000456658 548 ntBASIC1.67□□□□□ -2.14
SPTA1P02549 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.67□□□□□ -2.14
SPTA1P02549 AC090819.1-201ENST00000523800 1111 ntBASIC1.67□□□□□ -2.14
SPTA1P02549 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.67□□□□□ -2.14
SPTA1P02549 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.67□□□□□ -2.14
SPTA1P02549 AC067805.1-201ENST00000559344 470 ntBASIC1.67□□□□□ -2.14
SPTA1P02549 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.67□□□□□ -2.14
SPTA1P02549 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.67□□□□□ -2.14
SPTA1P02549 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.67□□□□□ -2.14
SPTA1P02549 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.67□□□□□ -2.14
SPTA1P02549 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.67□□□□□ -2.14
SPTA1P02549 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
SPTA1P02549 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.66□□□□□ -2.14
SPTA1P02549 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SPTA1P02549 BTBD10P2-201ENST00000404779 676 ntBASIC1.66□□□□□ -2.14
SPTA1P02549 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.66□□□□□ -2.14
SPTA1P02549 MUPP-201ENST00000438111 566 ntBASIC1.66□□□□□ -2.14
SPTA1P02549 GSTA11P-201ENST00000452866 669 ntBASIC1.66□□□□□ -2.14
SPTA1P02549 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.66□□□□□ -2.14
SPTA1P02549 AC107294.3-201ENST00000609211 526 ntBASIC1.66□□□□□ -2.14
SPTA1P02549 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.66□□□□□ -2.14
SPTA1P02549 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.66□□□□□ -2.14
SPTA1P02549 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.66□□□□□ -2.14
SPTA1P02549 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SPTA1P02549 AC092447.7-201ENST00000422212 1621 ntBASIC1.66□□□□□ -2.14
SPTA1P02549 RNU2-20P-201ENST00000410425 191 ntBASIC1.66□□□□□ -2.14
SPTA1P02549 AC008173.1-201ENST00000418901 264 ntBASIC1.66□□□□□ -2.14
SPTA1P02549 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.66□□□□□ -2.14
SPTA1P02549 HMGB1P31-201ENST00000437242 427 ntBASIC1.66□□□□□ -2.14
SPTA1P02549 AL357520.1-201ENST00000441557 453 ntBASIC1.66□□□□□ -2.14
SPTA1P02549 AC011979.1-201ENST00000472300 483 ntBASIC1.66□□□□□ -2.14
SPTA1P02549 AC109486.1-201ENST00000486833 374 ntBASIC1.66□□□□□ -2.14
SPTA1P02549 RPS29P11-201ENST00000496507 171 ntBASIC1.66□□□□□ -2.14
SPTA1P02549 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.66□□□□□ -2.14
SPTA1P02549 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.66□□□□□ -2.14
SPTA1P02549 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.66□□□□□ -2.14
SPTA1P02549 PDCD5P1-201ENST00000543528 309 ntBASIC1.66□□□□□ -2.14
SPTA1P02549 FAM106DP-201ENST00000586416 501 ntBASIC1.66□□□□□ -2.14
SPTA1P02549 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.66□□□□□ -2.14
SPTA1P02549 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SPTA1P02549 AC067852.7-201ENST00000623270 535 ntBASIC1.66□□□□□ -2.14
SPTA1P02549 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.66□□□□□ -2.14
SPTA1P02549 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.65□□□□□ -2.14
SPTA1P02549 MIR6073-201ENST00000352083 89 ntBASIC1.65□□□□□ -2.15
SPTA1P02549 TAS2R15P-201ENST00000390674 928 ntBASIC1.65□□□□□ -2.15
SPTA1P02549 SNORA79B-201ENST00000410557 148 ntBASIC1.65□□□□□ -2.15
SPTA1P02549 AC013470.3-201ENST00000420252 1194 ntBASIC1.65□□□□□ -2.15
SPTA1P02549 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.65□□□□□ -2.15
SPTA1P02549 CBWD4P-201ENST00000445695 655 ntBASIC1.65□□□□□ -2.15
SPTA1P02549 Z99714.1-201ENST00000450463 807 ntBASIC1.65□□□□□ -2.15
SPTA1P02549 AF131216.2-201ENST00000512316 564 ntBASIC1.65□□□□□ -2.15
SPTA1P02549 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.65□□□□□ -2.15
SPTA1P02549 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.65□□□□□ -2.15
SPTA1P02549 MIR8081-201ENST00000611533 95 ntBASIC1.65□□□□□ -2.15
SPTA1P02549 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.65□□□□□ -2.15
SPTA1P02549 SNORA50A-202ENST00000629536 136 ntBASIC1.65□□□□□ -2.15
SPTA1P02549 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SPTA1P02549 MIR365B-201ENST00000362317 111 ntBASIC1.65□□□□□ -2.15
SPTA1P02549 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SPTA1P02549 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.65□□□□□ -2.15
SPTA1P02549 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.65□□□□□ -2.15
SPTA1P02549 AC060766.3-201ENST00000591442 263 ntBASIC1.65□□□□□ -2.15
SPTA1P02549 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.65□□□□□ -2.15
SPTA1P02549 ZNF876P-202ENST00000398732 1485 ntBASIC1.65□□□□□ -2.15
SPTA1P02549 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SPTA1P02549 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SPTA1P02549 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.64□□□□□ -2.15
SPTA1P02549 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.64□□□□□ -2.15
SPTA1P02549 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.64□□□□□ -2.15
SPTA1P02549 snoU109.4-201ENST00000458953 143 ntBASIC1.64□□□□□ -2.15
SPTA1P02549 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.64□□□□□ -2.15
SPTA1P02549 AP000926.1-201ENST00000479573 241 ntBASIC1.64□□□□□ -2.15
SPTA1P02549 AC107393.1-201ENST00000512403 346 ntBASIC1.64□□□□□ -2.15
SPTA1P02549 AC019176.1-201ENST00000518519 225 ntBASIC1.64□□□□□ -2.15
SPTA1P02549 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
SPTA1P02549 CBX3P4-201ENST00000538909 354 ntBASIC1.64□□□□□ -2.15
SPTA1P02549 SNORD53B-201ENST00000577887 78 ntBASIC1.64□□□□□ -2.15
SPTA1P02549 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.64□□□□□ -2.15
SPTA1P02549 AL121917.1-203ENST00000605534 577 ntBASIC1.64□□□□□ -2.15
SPTA1P02549 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
SPTA1P02549 SET-203ENST00000372688 801 ntTSL 2 BASIC1.64□□□□□ -2.15
SPTA1P02549 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.64□□□□□ -2.15
SPTA1P02549 AC073310.1-201ENST00000423226 1033 ntBASIC1.64□□□□□ -2.15
SPTA1P02549 BNIP3P2-201ENST00000441221 577 ntBASIC1.64□□□□□ -2.15
SPTA1P02549 AC008571.1-201ENST00000467232 300 ntBASIC1.64□□□□□ -2.15
SPTA1P02549 AC010265.1-201ENST00000513509 211 ntBASIC1.64□□□□□ -2.15
SPTA1P02549 SNORA25.15-201ENST00000516487 89 ntBASIC1.64□□□□□ -2.15
SPTA1P02549 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.64□□□□□ -2.15
SPTA1P02549 MTND5P21-201ENST00000531961 522 ntBASIC1.64□□□□□ -2.15
SPTA1P02549 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.64□□□□□ -2.15
SPTA1P02549 AC069234.5-201ENST00000611056 416 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms