Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TMEM248P1-201ENST00000510579 951 ntBASIC2.41□□□□□ -2.02
COL1A1P02452 RNU6-319P-201ENST00000516025 108 ntBASIC2.41□□□□□ -2.02
COL1A1P02452 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.41□□□□□ -2.02
COL1A1P02452 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.41□□□□□ -2.02
COL1A1P02452 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.41□□□□□ -2.02
COL1A1P02452 AC110588.1-201ENST00000559699 137 ntBASIC2.41□□□□□ -2.02
COL1A1P02452 AC128687.1-201ENST00000605304 619 ntBASIC2.41□□□□□ -2.02
COL1A1P02452 AC006023.2-201ENST00000609916 167 ntBASIC2.41□□□□□ -2.02
COL1A1P02452 AC131902.3-201ENST00000611767 581 ntBASIC2.41□□□□□ -2.02
COL1A1P02452 AP005901.5-201ENST00000545779 1796 ntBASIC2.41□□□□□ -2.02
COL1A1P02452 AC110774.1-201ENST00000623567 2018 ntBASIC2.41□□□□□ -2.02
COL1A1P02452 SPA17P1-201ENST00000416656 452 ntBASIC2.4□□□□□ -2.02
COL1A1P02452 DPPA2P1-201ENST00000428060 556 ntBASIC2.4□□□□□ -2.02
COL1A1P02452 RPL23AP7-203ENST00000449021 469 ntBASIC2.4□□□□□ -2.02
COL1A1P02452 AC006483.1-201ENST00000487308 313 ntBASIC2.4□□□□□ -2.02
COL1A1P02452 Y_RNA.670-201ENST00000516255 105 ntBASIC2.4□□□□□ -2.02
COL1A1P02452 MIR5089-201ENST00000580047 84 ntBASIC2.4□□□□□ -2.02
COL1A1P02452 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.4□□□□□ -2.02
COL1A1P02452 RMST_5.1-201ENST00000618704 126 ntBASIC2.4□□□□□ -2.02
COL1A1P02452 AC092650.2-201ENST00000619984 902 ntBASIC2.4□□□□□ -2.02
COL1A1P02452 AC244517.12-201ENST00000623581 663 ntBASIC2.4□□□□□ -2.02
COL1A1P02452 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
COL1A1P02452 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.4□□□□□ -2.03
COL1A1P02452 AL353746.1-201ENST00000566293 6881 ntBASIC2.4□□□□□ -2.03
COL1A1P02452 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
COL1A1P02452 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.4□□□□□ -2.03
COL1A1P02452 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
COL1A1P02452 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL1A1P02452 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL1A1P02452 RNU6-666P-201ENST00000363499 107 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 RNA5SP160-201ENST00000364866 120 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 FNDC3CP-201ENST00000420795 1155 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 CBWD4P-201ENST00000445695 655 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.39□□□□□ -2.03
COL1A1P02452 AC104308.1-201ENST00000454621 333 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 MTCO1P42-201ENST00000457379 726 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 RPL37P6-202ENST00000464216 403 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.39□□□□□ -2.03
COL1A1P02452 MTAPP1-201ENST00000489154 819 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 RPS29P11-201ENST00000496507 171 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.39□□□□□ -2.03
COL1A1P02452 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.39□□□□□ -2.03
COL1A1P02452 GNAI2P1-201ENST00000541815 315 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.39□□□□□ -2.03
COL1A1P02452 AC103810.1-201ENST00000579873 453 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.39□□□□□ -2.03
COL1A1P02452 AC012321.1-201ENST00000561622 1588 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL1A1P02452 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL1A1P02452 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
COL1A1P02452 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
COL1A1P02452 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
COL1A1P02452 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
COL1A1P02452 Y_RNA.62-201ENST00000362840 99 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 SNORA51.2-201ENST00000364595 132 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 SNORA25.9-201ENST00000365087 128 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 MIR9-3-201ENST00000385084 90 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.39□□□□□ -2.03
COL1A1P02452 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
COL1A1P02452 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.39□□□□□ -2.03
COL1A1P02452 RPL23AP33-201ENST00000442301 452 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.39□□□□□ -2.03
COL1A1P02452 HMGN2P16-201ENST00000456802 261 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.39□□□□□ -2.03
COL1A1P02452 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.39□□□□□ -2.03
COL1A1P02452 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.39□□□□□ -2.03
COL1A1P02452 PRELID2P1-201ENST00000552837 301 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 AC034268.2-201ENST00000571784 482 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.39□□□□□ -2.03
COL1A1P02452 AL133393.1-201ENST00000603277 287 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 MFSD8-245ENST00000641743 948 ntBASIC2.39□□□□□ -2.03
COL1A1P02452 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.38□□□□□ -2.03
COL1A1P02452 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
COL1A1P02452 AC010680.1-201ENST00000590024 3590 ntBASIC2.38□□□□□ -2.03
COL1A1P02452 MIR337-201ENST00000362281 93 ntBASIC2.38□□□□□ -2.03
COL1A1P02452 RNA5SP498-201ENST00000411342 120 ntBASIC2.38□□□□□ -2.03
COL1A1P02452 EI24P1-201ENST00000416584 867 ntBASIC2.38□□□□□ -2.03
COL1A1P02452 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.38□□□□□ -2.03
COL1A1P02452 AC027124.2-201ENST00000428249 105 ntBASIC2.38□□□□□ -2.03
COL1A1P02452 AL031663.1-201ENST00000437445 219 ntBASIC2.38□□□□□ -2.03
COL1A1P02452 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.38□□□□□ -2.03
COL1A1P02452 HIGD1AP11-201ENST00000438361 280 ntBASIC2.38□□□□□ -2.03
COL1A1P02452 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.38□□□□□ -2.03
COL1A1P02452 HSPE1P28-201ENST00000443139 211 ntBASIC2.38□□□□□ -2.03
COL1A1P02452 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.38□□□□□ -2.03
COL1A1P02452 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.38□□□□□ -2.03
COL1A1P02452 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.38□□□□□ -2.03
COL1A1P02452 GTF2IP9-201ENST00000502460 301 ntBASIC2.38□□□□□ -2.03
COL1A1P02452 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.38□□□□□ -2.03
COL1A1P02452 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.38□□□□□ -2.03
COL1A1P02452 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.38□□□□□ -2.03
COL1A1P02452 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.38□□□□□ -2.03
COL1A1P02452 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.38□□□□□ -2.03
COL1A1P02452 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.38□□□□□ -2.03
COL1A1P02452 RPAP2P1-201ENST00000603626 1168 ntBASIC2.38□□□□□ -2.03
COL1A1P02452 AC091834.1-201ENST00000614543 472 ntBASIC2.38□□□□□ -2.03
COL1A1P02452 AC108479.2-201ENST00000617314 601 ntBASIC2.38□□□□□ -2.03
COL1A1P02452 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.38□□□□□ -2.03
COL1A1P02452 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms