Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL031679.1-201ENST00000400616 525 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 TPMTP2-201ENST00000414372 726 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 TIMM9P2-201ENST00000419324 266 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 ATP5F1P1-201ENST00000433775 569 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 OR6K5P-201ENST00000447050 945 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC007327.1-201ENST00000447461 264 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AL031313.1-201ENST00000448435 256 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 RPL21P41-201ENST00000459863 264 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC114981.1-201ENST00000503897 678 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC119751.4-201ENST00000507498 357 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 SAP18P1-201ENST00000512058 390 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC006499.2-201ENST00000513470 337 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 RNU6-56P-201ENST00000516986 93 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC026403.1-201ENST00000518938 295 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC107016.2-201ENST00000547968 190 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC020914.6-201ENST00000594327 272 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC080013.4-201ENST00000607624 649 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC131235.4-201ENST00000609288 620 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC107075.1-201ENST00000613695 314 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC068831.7-201ENST00000616954 363 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC002076.2-201ENST00000617362 122 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC010338.1-201ENST00000621823 717 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC231657.1-201ENST00000624313 397 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 ASNSP3-201ENST00000451989 1306 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 ZNF807-201ENST00000328088 1707 ntBASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
HLA-DQA1P01909 AC002546.1-201ENST00000588041 2504 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AC103988.1-201ENST00000566382 2177 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AL022578.1-201ENST00000439330 1433 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AL161431.1-201ENST00000618966 4205 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 RPL9P7-201ENST00000330965 580 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 RNA5SP50-201ENST00000363731 107 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 RNU6-343P-201ENST00000364709 104 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 RNU6-925P-201ENST00000384629 104 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 MIR592-201ENST00000384959 97 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 RNU1-101P-201ENST00000391171 127 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 HMGB1P17-201ENST00000403495 628 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AL137014.1-201ENST00000420490 1226 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 BEND7P1-201ENST00000422058 457 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AL513175.2-201ENST00000422071 443 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AL139421.1-201ENST00000423010 169 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AC104332.2-201ENST00000429959 156 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AC091286.1-201ENST00000431233 461 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AC004866.2-201ENST00000438285 481 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 SDR42E1P3-201ENST00000438345 502 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 MTCO2P25-201ENST00000447065 681 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AL009048.1-201ENST00000450437 298 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 ZNF886P-201ENST00000450781 723 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 CYCSP35-201ENST00000451978 304 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 RNU7-136P-201ENST00000458819 69 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 RPL21P10-201ENST00000463521 490 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 RN7SL297P-201ENST00000483161 293 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AC106707.2-201ENST00000484182 374 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 UBE2V1P12-201ENST00000503954 474 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 ARL4AP2-201ENST00000507378 601 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AC017037.2-201ENST00000513850 890 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AC022690.1-201ENST00000526681 550 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AP000857.1-201ENST00000532151 543 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AL391156.1-201ENST00000554965 554 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AL512347.1-201ENST00000566420 503 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AC034105.4-201ENST00000568304 277 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 MIR3670-2-201ENST00000582974 65 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 MIR3670-1-201ENST00000584160 65 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 MIR3670-3-201ENST00000584855 65 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AP001269.3-201ENST00000588718 329 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 BNIP3P39-201ENST00000601077 554 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms