Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 CDC42P1-201ENST00000456658 548 ntBASIC2.69□□□□□ -1.98
POLR1AO95602 RPL21P39-201ENST00000463605 483 ntBASIC2.69□□□□□ -1.98
POLR1AO95602 AC104564.1-201ENST00000493028 407 ntBASIC2.69□□□□□ -1.98
POLR1AO95602 AC011352.3-201ENST00000505162 593 ntBASIC2.69□□□□□ -1.98
POLR1AO95602 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.69□□□□□ -1.98
POLR1AO95602 MIR6504-201ENST00000613520 61 ntBASIC2.69□□□□□ -1.98
POLR1AO95602 AL118496.1-201ENST00000440201 1812 ntBASIC2.69□□□□□ -1.98
POLR1AO95602 AL592437.2-201ENST00000421655 2434 ntBASIC2.69□□□□□ -1.98
POLR1AO95602 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
POLR1AO95602 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
POLR1AO95602 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.68□□□□□ -1.98
POLR1AO95602 RNU6-392P-201ENST00000364926 101 ntBASIC2.68□□□□□ -1.98
POLR1AO95602 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.68□□□□□ -1.98
POLR1AO95602 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR1AO95602 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR1AO95602 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.68□□□□□ -1.98
POLR1AO95602 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.68□□□□□ -1.98
POLR1AO95602 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
POLR1AO95602 RNU6-582P-201ENST00000362989 107 ntBASIC2.68□□□□□ -1.98
POLR1AO95602 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.68□□□□□ -1.98
POLR1AO95602 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.68□□□□□ -1.98
POLR1AO95602 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.68□□□□□ -1.98
POLR1AO95602 AP004242.1-201ENST00000533701 349 ntBASIC2.68□□□□□ -1.98
POLR1AO95602 AC124283.4-201ENST00000581815 456 ntBASIC2.68□□□□□ -1.98
POLR1AO95602 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR1AO95602 KPNA2P1-201ENST00000458289 1591 ntBASIC2.67□□□□□ -1.98
POLR1AO95602 Z82209.1-201ENST00000422141 2135 ntBASIC2.67□□□□□ -1.98
POLR1AO95602 AL590084.1-201ENST00000407885 387 ntBASIC2.67□□□□□ -1.98
POLR1AO95602 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
POLR1AO95602 DPPA3P1-201ENST00000448050 469 ntBASIC2.67□□□□□ -1.98
POLR1AO95602 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.67□□□□□ -1.98
POLR1AO95602 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.67□□□□□ -1.98
POLR1AO95602 SNORA4-201ENST00000584302 138 ntBASIC2.67□□□□□ -1.98
POLR1AO95602 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
POLR1AO95602 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
POLR1AO95602 MIR1294-201ENST00000408503 142 ntBASIC2.66□□□□□ -1.98
POLR1AO95602 RPL17P12-201ENST00000413391 526 ntBASIC2.66□□□□□ -1.98
POLR1AO95602 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.66□□□□□ -1.98
POLR1AO95602 AC009237.2-201ENST00000421358 284 ntBASIC2.66□□□□□ -1.98
POLR1AO95602 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.66□□□□□ -1.98
POLR1AO95602 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
POLR1AO95602 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
POLR1AO95602 AC135999.1-201ENST00000478962 479 ntBASIC2.66□□□□□ -1.98
POLR1AO95602 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
POLR1AO95602 MTND4LP22-201ENST00000508209 276 ntBASIC2.66□□□□□ -1.98
POLR1AO95602 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.66□□□□□ -1.98
POLR1AO95602 MYL12BP1-201ENST00000569826 507 ntBASIC2.66□□□□□ -1.98
POLR1AO95602 WISP1-OT1-201ENST00000602893 642 ntBASIC2.66□□□□□ -1.98
POLR1AO95602 FO624990.1-201ENST00000636373 85 ntBASIC2.66□□□□□ -1.98
POLR1AO95602 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
POLR1AO95602 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
POLR1AO95602 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
POLR1AO95602 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
POLR1AO95602 RPL7P37-201ENST00000425095 738 ntBASIC2.65□□□□□ -1.98
POLR1AO95602 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.65□□□□□ -1.98
POLR1AO95602 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
POLR1AO95602 AIG1P1-201ENST00000503376 148 ntBASIC2.65□□□□□ -1.98
POLR1AO95602 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.65□□□□□ -1.98
POLR1AO95602 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
POLR1AO95602 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
POLR1AO95602 AC000367.1-201ENST00000452711 1766 ntBASIC2.65□□□□□ -1.99
POLR1AO95602 AL139811.1-201ENST00000424779 2299 ntBASIC2.65□□□□□ -1.99
POLR1AO95602 USP9YP6-201ENST00000413550 854 ntBASIC2.65□□□□□ -1.99
POLR1AO95602 RPS7P9-201ENST00000414704 586 ntBASIC2.65□□□□□ -1.99
POLR1AO95602 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.65□□□□□ -1.99
POLR1AO95602 AL451074.3-201ENST00000437709 472 ntBASIC2.65□□□□□ -1.99
POLR1AO95602 USP9YP34-201ENST00000453983 808 ntBASIC2.65□□□□□ -1.99
POLR1AO95602 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.65□□□□□ -1.99
POLR1AO95602 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC2.65□□□□□ -1.99
POLR1AO95602 RN7SKP40-201ENST00000517211 242 ntBASIC2.65□□□□□ -1.99
POLR1AO95602 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.65□□□□□ -1.99
POLR1AO95602 MIR6779-201ENST00000617283 64 ntBASIC2.65□□□□□ -1.99
POLR1AO95602 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.64□□□□□ -1.99
POLR1AO95602 RPL21P75-201ENST00000396599 483 ntBASIC2.64□□□□□ -1.99
POLR1AO95602 RPL21P1-201ENST00000399532 476 ntBASIC2.64□□□□□ -1.99
POLR1AO95602 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
POLR1AO95602 RPL21P28-201ENST00000401418 483 ntBASIC2.64□□□□□ -1.99
POLR1AO95602 AL592114.1-201ENST00000403842 483 ntBASIC2.64□□□□□ -1.99
POLR1AO95602 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.64□□□□□ -1.99
POLR1AO95602 MTAPP1-201ENST00000489154 819 ntBASIC2.64□□□□□ -1.99
POLR1AO95602 RPL21P16-201ENST00000495531 483 ntBASIC2.64□□□□□ -1.99
POLR1AO95602 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.64□□□□□ -1.99
POLR1AO95602 MIR4446-201ENST00000578505 67 ntBASIC2.64□□□□□ -1.99
POLR1AO95602 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
POLR1AO95602 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.64□□□□□ -1.99
POLR1AO95602 AC103710.2-202ENST00000641454 2853 ntBASIC2.64□□□□□ -1.99
POLR1AO95602 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.63□□□□□ -1.99
POLR1AO95602 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.63□□□□□ -1.99
POLR1AO95602 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.63□□□□□ -1.99
POLR1AO95602 RNA5SP82-201ENST00000516707 92 ntBASIC2.63□□□□□ -1.99
POLR1AO95602 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.63□□□□□ -1.99
POLR1AO95602 AL035411.2-201ENST00000604022 421 ntBASIC2.63□□□□□ -1.99
POLR1AO95602 uc_338.5-201ENST00000611839 155 ntBASIC2.63□□□□□ -1.99
POLR1AO95602 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.62□□□□□ -1.99
POLR1AO95602 AC009238.1-201ENST00000442165 424 ntBASIC2.62□□□□□ -1.99
POLR1AO95602 AC009237.6-201ENST00000446969 424 ntBASIC2.62□□□□□ -1.99
POLR1AO95602 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.62□□□□□ -1.99
POLR1AO95602 RPL5P13-201ENST00000462840 709 ntBASIC2.62□□□□□ -1.99
POLR1AO95602 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.62□□□□□ -1.99
POLR1AO95602 AC012150.2-201ENST00000621300 544 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms