Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.99□□□□□ -1.77
CUX2O14529 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.99□□□□□ -1.77
CUX2O14529 MIR5007-201ENST00000583098 95 ntBASIC3.99□□□□□ -1.77
CUX2O14529 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.99□□□□□ -1.77
CUX2O14529 ABI1P1-201ENST00000603375 1120 ntBASIC3.99□□□□□ -1.77
CUX2O14529 STMN1P1-201ENST00000617809 440 ntBASIC3.99□□□□□ -1.77
CUX2O14529 AC073569.3-201ENST00000619055 682 ntBASIC3.99□□□□□ -1.77
CUX2O14529 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CUX2O14529 MIR6733-201ENST00000635723 61 ntBASIC3.99□□□□□ -1.77
CUX2O14529 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CUX2O14529 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.99□□□□□ -1.77
CUX2O14529 SEC63P2-201ENST00000503863 1939 ntBASIC3.99□□□□□ -1.77
CUX2O14529 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.99□□□□□ -1.77
CUX2O14529 AL133412.1-201ENST00000380194 2992 ntBASIC3.99□□□□□ -1.77
CUX2O14529 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.98□□□□□ -1.77
CUX2O14529 SNORD88.1-201ENST00000408684 91 ntBASIC3.98□□□□□ -1.77
CUX2O14529 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.98□□□□□ -1.77
CUX2O14529 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.98□□□□□ -1.77
CUX2O14529 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.98□□□□□ -1.77
CUX2O14529 AC126182.1-201ENST00000478134 357 ntBASIC3.98□□□□□ -1.77
CUX2O14529 AC026436.1-201ENST00000510537 270 ntBASIC3.98□□□□□ -1.77
CUX2O14529 RN7SKP234-201ENST00000517173 224 ntBASIC3.98□□□□□ -1.77
CUX2O14529 AC083923.1-201ENST00000523708 376 ntBASIC3.98□□□□□ -1.77
CUX2O14529 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.98□□□□□ -1.77
CUX2O14529 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.98□□□□□ -1.77
CUX2O14529 RMST_10.1-201ENST00000616309 154 ntBASIC3.98□□□□□ -1.77
CUX2O14529 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CUX2O14529 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CUX2O14529 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CUX2O14529 MIR16-2-201ENST00000362117 81 ntBASIC3.98□□□□□ -1.77
CUX2O14529 RNA5SP391-201ENST00000363456 119 ntBASIC3.98□□□□□ -1.77
CUX2O14529 RNU6-457P-201ENST00000363999 107 ntBASIC3.98□□□□□ -1.77
CUX2O14529 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.98□□□□□ -1.77
CUX2O14529 RPL17P35-201ENST00000432217 549 ntBASIC3.98□□□□□ -1.77
CUX2O14529 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.98□□□□□ -1.77
CUX2O14529 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.98□□□□□ -1.77
CUX2O14529 AC068135.1-201ENST00000446164 246 ntBASIC3.98□□□□□ -1.77
CUX2O14529 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.98□□□□□ -1.77
CUX2O14529 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.98□□□□□ -1.77
CUX2O14529 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.98□□□□□ -1.77
CUX2O14529 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.98□□□□□ -1.77
CUX2O14529 AC027338.1-201ENST00000514840 825 ntBASIC3.98□□□□□ -1.77
CUX2O14529 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.98□□□□□ -1.77
CUX2O14529 AL136964.1-201ENST00000622038 2990 ntBASIC3.98□□□□□ -1.77
CUX2O14529 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CUX2O14529 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CUX2O14529 RN7SKP44-201ENST00000363602 316 ntBASIC3.97□□□□□ -1.77
CUX2O14529 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.97□□□□□ -1.77
CUX2O14529 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CUX2O14529 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.97□□□□□ -1.77
CUX2O14529 AL023284.1-201ENST00000403956 276 ntBASIC3.97□□□□□ -1.77
CUX2O14529 AC008173.1-201ENST00000418901 264 ntBASIC3.97□□□□□ -1.77
CUX2O14529 AC023347.2-201ENST00000433994 462 ntBASIC3.97□□□□□ -1.77
CUX2O14529 RPL23AP76-201ENST00000441860 458 ntBASIC3.97□□□□□ -1.77
CUX2O14529 AC009238.1-201ENST00000442165 424 ntBASIC3.97□□□□□ -1.77
CUX2O14529 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.97□□□□□ -1.77
CUX2O14529 AC009237.6-201ENST00000446969 424 ntBASIC3.97□□□□□ -1.77
CUX2O14529 AC096992.1-201ENST00000459808 709 ntBASIC3.97□□□□□ -1.77
CUX2O14529 MTND3P24-201ENST00000506306 329 ntBASIC3.97□□□□□ -1.77
CUX2O14529 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.97□□□□□ -1.77
CUX2O14529 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.97□□□□□ -1.77
CUX2O14529 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.97□□□□□ -1.77
CUX2O14529 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.97□□□□□ -1.77
CUX2O14529 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.97□□□□□ -1.77
CUX2O14529 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.97□□□□□ -1.77
CUX2O14529 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.97□□□□□ -1.77
CUX2O14529 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.97□□□□□ -1.77
CUX2O14529 AC112503.2-201ENST00000609005 552 ntBASIC3.97□□□□□ -1.77
CUX2O14529 RMST_2.1-201ENST00000617263 136 ntBASIC3.97□□□□□ -1.77
CUX2O14529 AL163051.2-201ENST00000618976 735 ntBASIC3.97□□□□□ -1.77
CUX2O14529 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CUX2O14529 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
CUX2O14529 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
CUX2O14529 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CUX2O14529 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CUX2O14529 ENSAP3-201ENST00000312710 333 ntBASIC3.96□□□□□ -1.78
CUX2O14529 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
CUX2O14529 RNU6-543P-201ENST00000362576 108 ntBASIC3.96□□□□□ -1.78
CUX2O14529 RNU6-796P-201ENST00000391086 107 ntBASIC3.96□□□□□ -1.78
CUX2O14529 AP1B1P2-201ENST00000416196 106 ntBASIC3.96□□□□□ -1.78
CUX2O14529 AIMP1P1-201ENST00000418670 937 ntBASIC3.96□□□□□ -1.78
CUX2O14529 RWDD4P2-201ENST00000426392 563 ntBASIC3.96□□□□□ -1.78
CUX2O14529 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.96□□□□□ -1.78
CUX2O14529 RWDD4P1-201ENST00000488019 565 ntBASIC3.96□□□□□ -1.78
CUX2O14529 AC140059.1-201ENST00000489238 361 ntBASIC3.96□□□□□ -1.78
CUX2O14529 AC110792.2-201ENST00000510278 224 ntBASIC3.96□□□□□ -1.78
CUX2O14529 AC008494.2-201ENST00000514544 370 ntBASIC3.96□□□□□ -1.78
CUX2O14529 AC011611.5-201ENST00000552477 578 ntBASIC3.96□□□□□ -1.78
CUX2O14529 MIR5092-201ENST00000583139 88 ntBASIC3.96□□□□□ -1.78
CUX2O14529 AC012254.4-201ENST00000588843 273 ntBASIC3.96□□□□□ -1.78
CUX2O14529 AC020923.1-201ENST00000624021 917 ntBASIC3.96□□□□□ -1.78
CUX2O14529 AL356094.1-201ENST00000624663 1212 ntBASIC3.96□□□□□ -1.78
CUX2O14529 AC017104.5-201ENST00000637647 639 ntBASIC3.96□□□□□ -1.78
CUX2O14529 AC132825.7-201ENST00000638744 335 ntBASIC3.96□□□□□ -1.78
CUX2O14529 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CUX2O14529 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.95□□□□□ -1.78
CUX2O14529 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CUX2O14529 PTGES3P2-201ENST00000407942 482 ntBASIC3.95□□□□□ -1.78
CUX2O14529 AC004022.2-201ENST00000413824 193 ntBASIC3.95□□□□□ -1.78
CUX2O14529 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms