Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC004217.3-201ENST00000551552 878 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.96□□□□□ -2.1
SDCBPO00560 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.96□□□□□ -2.1
SDCBPO00560 AC025281.1-201ENST00000567026 265 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 AC105137.2-201ENST00000569073 466 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 AC009163.5-201ENST00000575421 637 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 AC007336.1-201ENST00000576365 3828 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 MIR5194-201ENST00000582634 120 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 AC106900.2-201ENST00000604994 317 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 AC024560.3-201ENST00000608482 349 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 AC013468.1-201ENST00000608680 598 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 AC140725.3-201ENST00000616193 880 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.96□□□□□ -2.1
SDCBPO00560 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.96□□□□□ -2.1
SDCBPO00560 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SDCBPO00560 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.96□□□□□ -2.1
SDCBPO00560 AC007998.5-201ENST00000622938 237 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 MIR1291-201ENST00000627649 87 ntBASIC1.96□□□□□ -2.1
SDCBPO00560 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.96□□□□□ -2.1
SDCBPO00560 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SDCBPO00560 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.96□□□□□ -2.1
SDCBPO00560 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.96□□□□□ -2.1
SDCBPO00560 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SDCBPO00560 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SDCBPO00560 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.95□□□□□ -2.1
SDCBPO00560 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SDCBPO00560 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SDCBPO00560 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SDCBPO00560 RNU6-1180P-201ENST00000364935 107 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 RNU6-441P-201ENST00000384545 106 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 RPS4XP3-201ENST00000398541 413 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 AL031679.1-201ENST00000400616 525 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 RPS4XP8-201ENST00000402039 771 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 ATP5F1P6-201ENST00000402768 767 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SDCBPO00560 AC009237.2-201ENST00000421358 284 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.95□□□□□ -2.1
SDCBPO00560 MTCO1P39-201ENST00000426148 480 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.95□□□□□ -2.1
SDCBPO00560 MTATP6P11-201ENST00000428071 670 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 SUMO1P4-201ENST00000429430 302 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 AL590664.1-201ENST00000448065 339 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.95□□□□□ -2.1
SDCBPO00560 AC104073.1-201ENST00000451988 151 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 RPS3P1-201ENST00000456781 192 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.95□□□□□ -2.1
SDCBPO00560 RPS4XP6-201ENST00000477670 797 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.95□□□□□ -2.1
SDCBPO00560 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.95□□□□□ -2.1
SDCBPO00560 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.95□□□□□ -2.1
SDCBPO00560 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.95□□□□□ -2.1
SDCBPO00560 RPPH1-2P-201ENST00000516688 293 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.95□□□□□ -2.1
SDCBPO00560 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.95□□□□□ -2.1
SDCBPO00560 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.95□□□□□ -2.1
SDCBPO00560 AC126177.3-201ENST00000551839 688 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 AC027104.1-201ENST00000563702 681 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 AC234778.2-201ENST00000566241 354 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.95□□□□□ -2.1
SDCBPO00560 AC012254.4-201ENST00000588843 273 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 AP003400.6-201ENST00000624698 740 ntBASIC1.95□□□□□ -2.1
SDCBPO00560 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SDCBPO00560 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.95□□□□□ -2.1
SDCBPO00560 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
SDCBPO00560 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.95□□□□□ -2.1
SDCBPO00560 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SDCBPO00560 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SDCBPO00560 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
SDCBPO00560 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SDCBPO00560 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.94□□□□□ -2.1
SDCBPO00560 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.94□□□□□ -2.1
SDCBPO00560 SNORA51.12-201ENST00000384448 134 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 MIR144-201ENST00000384886 86 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 RNU2-25P-201ENST00000411041 191 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.94□□□□□ -2.1
SDCBPO00560 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.94□□□□□ -2.1
SDCBPO00560 NANOGP5-201ENST00000424456 877 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 RPL7P37-201ENST00000425095 738 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SDCBPO00560 RPP40P1-201ENST00000426762 456 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 RPS15AP28-201ENST00000435088 386 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.94□□□□□ -2.1
SDCBPO00560 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SDCBPO00560 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.94□□□□□ -2.1
SDCBPO00560 OR9N1P-202ENST00000494289 481 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.94□□□□□ -2.1
SDCBPO00560 AC234781.5-201ENST00000508429 271 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SDCBPO00560 RNU6-488P-201ENST00000515918 99 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 RNU4-29P-201ENST00000515943 174 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SDCBPO00560 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.94□□□□□ -2.1
SDCBPO00560 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.94□□□□□ -2.1
SDCBPO00560 AC106782.4-201ENST00000568264 210 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.94□□□□□ -2.1
SDCBPO00560 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.94□□□□□ -2.1
SDCBPO00560 AC006023.1-201ENST00000603944 259 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 HSPE1P7-201ENST00000604681 321 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 AC026790.2-201ENST00000606282 430 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms