Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC109446.2-201ENST00000567872 497 ntBASIC1.89□□□□□ -2.11
CACNA1AO00555 RPS3AP23-202ENST00000574601 686 ntBASIC1.89□□□□□ -2.11
CACNA1AO00555 AL157834.3-201ENST00000615543 103 ntBASIC1.89□□□□□ -2.11
CACNA1AO00555 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CACNA1AO00555 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CACNA1AO00555 Z98749.2-208ENST00000381646 500 ntBASIC1.89□□□□□ -2.11
CACNA1AO00555 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.89□□□□□ -2.11
CACNA1AO00555 MRPS36P1-201ENST00000421291 307 ntBASIC1.89□□□□□ -2.11
CACNA1AO00555 AL445685.2-201ENST00000422551 342 ntBASIC1.89□□□□□ -2.11
CACNA1AO00555 AL606490.7-201ENST00000433136 191 ntBASIC1.89□□□□□ -2.11
CACNA1AO00555 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC1.89□□□□□ -2.11
CACNA1AO00555 IGHV3-76-201ENST00000522465 295 ntBASIC1.89□□□□□ -2.11
CACNA1AO00555 AC131902.3-201ENST00000611767 581 ntBASIC1.89□□□□□ -2.11
CACNA1AO00555 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CACNA1AO00555 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CACNA1AO00555 MIR21-201ENST00000362134 72 ntBASIC1.88□□□□□ -2.11
CACNA1AO00555 GCNT6-201ENST00000379591 934 ntBASIC1.88□□□□□ -2.11
CACNA1AO00555 AL358176.2-201ENST00000425769 204 ntBASIC1.88□□□□□ -2.11
CACNA1AO00555 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC1.88□□□□□ -2.11
CACNA1AO00555 PPIAP17-201ENST00000438507 471 ntBASIC1.88□□□□□ -2.11
CACNA1AO00555 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.88□□□□□ -2.11
CACNA1AO00555 MIR6767-201ENST00000637302 66 ntBASIC1.88□□□□□ -2.11
CACNA1AO00555 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CACNA1AO00555 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.88□□□□□ -2.11
CACNA1AO00555 CDC42P1-201ENST00000456658 548 ntBASIC1.88□□□□□ -2.11
CACNA1AO00555 AC011037.1-201ENST00000483964 558 ntBASIC1.88□□□□□ -2.11
CACNA1AO00555 RPS29P11-201ENST00000496507 171 ntBASIC1.88□□□□□ -2.11
CACNA1AO00555 AIG1P1-201ENST00000503376 148 ntBASIC1.88□□□□□ -2.11
CACNA1AO00555 SNORA25.15-201ENST00000516487 89 ntBASIC1.88□□□□□ -2.11
CACNA1AO00555 AL365503.1-201ENST00000605247 905 ntBASIC1.88□□□□□ -2.11
CACNA1AO00555 AL158032.1-201ENST00000605401 106 ntBASIC1.88□□□□□ -2.11
CACNA1AO00555 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.88□□□□□ -2.11
CACNA1AO00555 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CACNA1AO00555 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CACNA1AO00555 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CACNA1AO00555 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.87□□□□□ -2.11
CACNA1AO00555 RPL9P9-202ENST00000466501 579 ntBASIC1.87□□□□□ -2.11
CACNA1AO00555 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.87□□□□□ -2.11
CACNA1AO00555 AP003497.1-201ENST00000528472 562 ntBASIC1.87□□□□□ -2.11
CACNA1AO00555 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC1.87□□□□□ -2.11
CACNA1AO00555 AC068135.2-201ENST00000569293 1028 ntBASIC1.87□□□□□ -2.11
CACNA1AO00555 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.87□□□□□ -2.11
CACNA1AO00555 AC083760.1-201ENST00000589621 670 ntBASIC1.87□□□□□ -2.11
CACNA1AO00555 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.87□□□□□ -2.11
CACNA1AO00555 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.87□□□□□ -2.11
CACNA1AO00555 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC1.87□□□□□ -2.11
CACNA1AO00555 AC005297.2-201ENST00000450430 606 ntBASIC1.87□□□□□ -2.11
CACNA1AO00555 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.87□□□□□ -2.11
CACNA1AO00555 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.87□□□□□ -2.11
CACNA1AO00555 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.87□□□□□ -2.11
CACNA1AO00555 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.87□□□□□ -2.11
CACNA1AO00555 AC025946.2-201ENST00000603398 234 ntBASIC1.87□□□□□ -2.11
CACNA1AO00555 AL035411.2-201ENST00000604022 421 ntBASIC1.87□□□□□ -2.11
CACNA1AO00555 AC012557.2-201ENST00000605919 418 ntBASIC1.87□□□□□ -2.11
CACNA1AO00555 AC092650.2-201ENST00000619984 902 ntBASIC1.87□□□□□ -2.11
CACNA1AO00555 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC1.87□□□□□ -2.11
CACNA1AO00555 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CACNA1AO00555 MIR409-201ENST00000362237 79 ntBASIC1.86□□□□□ -2.11
CACNA1AO00555 RNU4-44P-201ENST00000363050 141 ntBASIC1.86□□□□□ -2.11
CACNA1AO00555 AL627390.1-201ENST00000396055 340 ntBASIC1.86□□□□□ -2.11
CACNA1AO00555 ARL5AP3-201ENST00000439327 386 ntBASIC1.86□□□□□ -2.11
CACNA1AO00555 AC055876.1-202ENST00000567053 138 ntBASIC1.86□□□□□ -2.11
CACNA1AO00555 AC105429.2-201ENST00000610567 517 ntBASIC1.86□□□□□ -2.11
CACNA1AO00555 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC1.86□□□□□ -2.11
CACNA1AO00555 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CACNA1AO00555 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
CACNA1AO00555 MTCO1P22-201ENST00000604619 1360 ntBASIC1.86□□□□□ -2.11
CACNA1AO00555 Y_RNA.258-201ENST00000364613 105 ntBASIC1.86□□□□□ -2.11
CACNA1AO00555 SNORA48.3-201ENST00000391081 134 ntBASIC1.86□□□□□ -2.11
CACNA1AO00555 AC004022.1-201ENST00000447766 1066 ntBASIC1.86□□□□□ -2.11
CACNA1AO00555 AC234775.1-201ENST00000454247 670 ntBASIC1.86□□□□□ -2.11
CACNA1AO00555 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.86□□□□□ -2.11
CACNA1AO00555 AC105313.1-201ENST00000509121 353 ntBASIC1.86□□□□□ -2.11
CACNA1AO00555 AL161670.1-201ENST00000554348 137 ntBASIC1.86□□□□□ -2.11
CACNA1AO00555 AC244517.12-201ENST00000623581 663 ntBASIC1.86□□□□□ -2.11
CACNA1AO00555 GTF2H2B-203ENST00000508065 1432 ntBASIC1.86□□□□□ -2.11
CACNA1AO00555 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CACNA1AO00555 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CACNA1AO00555 MIR142-201ENST00000384835 87 ntBASIC1.85□□□□□ -2.11
CACNA1AO00555 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.85□□□□□ -2.11
CACNA1AO00555 AP000254.1-201ENST00000609934 520 ntBASIC1.85□□□□□ -2.11
CACNA1AO00555 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.85□□□□□ -2.11
CACNA1AO00555 AP001148.1-201ENST00000624124 2359 ntBASIC1.85□□□□□ -2.11
CACNA1AO00555 MIR423-201ENST00000362201 94 ntBASIC1.85□□□□□ -2.11
CACNA1AO00555 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC1.85□□□□□ -2.11
CACNA1AO00555 RN7SKP285-201ENST00000410137 318 ntBASIC1.85□□□□□ -2.11
CACNA1AO00555 RNA5SP296-201ENST00000410523 111 ntBASIC1.85□□□□□ -2.11
CACNA1AO00555 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.85□□□□□ -2.11
CACNA1AO00555 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.85□□□□□ -2.11
CACNA1AO00555 AL138787.1-202ENST00000437804 898 ntBASIC1.85□□□□□ -2.11
CACNA1AO00555 snoU13.19-201ENST00000459148 104 ntBASIC1.85□□□□□ -2.11
CACNA1AO00555 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC1.85□□□□□ -2.11
CACNA1AO00555 AC107393.1-201ENST00000512403 346 ntBASIC1.85□□□□□ -2.11
CACNA1AO00555 AC090281.1-201ENST00000523019 276 ntBASIC1.85□□□□□ -2.11
CACNA1AO00555 AC105245.1-201ENST00000581934 244 ntBASIC1.85□□□□□ -2.11
CACNA1AO00555 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.85□□□□□ -2.11
CACNA1AO00555 RMST_9.1-201ENST00000619945 193 ntBASIC1.85□□□□□ -2.11
CACNA1AO00555 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.85□□□□□ -2.11
CACNA1AO00555 AC009487.4-201ENST00000624969 3585 ntBASIC1.85□□□□□ -2.11
CACNA1AO00555 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms