Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL445669.2-201ENST00000454425 421 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM1O00151 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM1O00151 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.12□□□□□ -1.91
PDLIM1O00151 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.12□□□□□ -1.91
PDLIM1O00151 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM1O00151 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.12□□□□□ -1.91
PDLIM1O00151 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM1O00151 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM1O00151 OR5B10P-201ENST00000532869 642 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.12□□□□□ -1.91
PDLIM1O00151 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.12□□□□□ -1.91
PDLIM1O00151 NBEAP1-201ENST00000554452 979 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 MTND4P33-201ENST00000556706 766 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.12□□□□□ -1.91
PDLIM1O00151 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.12□□□□□ -1.91
PDLIM1O00151 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.12□□□□□ -1.91
PDLIM1O00151 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM1O00151 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.12□□□□□ -1.91
PDLIM1O00151 AC012669.1-201ENST00000603209 283 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 AC008739.3-201ENST00000603262 127 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 AC010738.1-201ENST00000604970 987 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 AC006270.3-201ENST00000605967 1036 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 AC097478.2-201ENST00000610572 514 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 AL392048.1-201ENST00000613946 534 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM1O00151 AC091046.2-201ENST00000620775 665 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 AC244258.1-201ENST00000637553 1071 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PDLIM1O00151 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PDLIM1O00151 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PDLIM1O00151 AL079343.1-201ENST00000572358 1771 ntBASIC3.12□□□□□ -1.91
PDLIM1O00151 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PDLIM1O00151 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.12□□□□□ -1.91
PDLIM1O00151 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PDLIM1O00151 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.11□□□□□ -1.91
PDLIM1O00151 AC005539.1-201ENST00000443768 1479 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 AL390862.1-201ENST00000635467 1469 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.11□□□□□ -1.91
PDLIM1O00151 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDLIM1O00151 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDLIM1O00151 VTRNA1-1-201ENST00000363120 99 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.11□□□□□ -1.91
PDLIM1O00151 MIR181B1-201ENST00000385240 110 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 RNA5SP171-201ENST00000391071 115 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 DHFRP6-201ENST00000401776 268 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 SNORD88.1-201ENST00000408684 91 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 RPS29P4-201ENST00000414733 161 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 AC245054.2-201ENST00000415639 319 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 MTATP6P27-201ENST00000416987 621 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 SSXP9-201ENST00000417503 292 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 AC069157.1-201ENST00000421749 137 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 AL590233.1-201ENST00000430017 456 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.11□□□□□ -1.91
PDLIM1O00151 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.11□□□□□ -1.91
PDLIM1O00151 CR769776.1-201ENST00000441254 787 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 RPL26P28-201ENST00000451325 435 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.11□□□□□ -1.91
PDLIM1O00151 SUMO2P2-201ENST00000456482 255 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 RPL21P10-201ENST00000463521 490 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 RPS4XP10-201ENST00000465034 731 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PDLIM1O00151 ST13P14-201ENST00000474095 734 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 AC017015.1-201ENST00000477387 286 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 AC108729.1-201ENST00000487812 947 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 COX7A2P2-201ENST00000505291 250 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.11□□□□□ -1.91
PDLIM1O00151 HSPA8P13-201ENST00000523715 472 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 OR5AK1P-201ENST00000524837 922 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDLIM1O00151 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.11□□□□□ -1.91
PDLIM1O00151 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.11□□□□□ -1.91
PDLIM1O00151 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.11□□□□□ -1.91
PDLIM1O00151 AC009712.1-201ENST00000564938 316 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 AGGF1P5-201ENST00000567900 919 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 AC023043.3-201ENST00000593113 385 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 AC091057.2-201ENST00000602594 792 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 AC080013.3-201ENST00000606839 578 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 AC025588.4-201ENST00000615802 908 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 AL049780.3-201ENST00000624612 1583 ntBASIC3.11□□□□□ -1.91
PDLIM1O00151 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.11□□□□□ -1.91
PDLIM1O00151 MTND5P24-201ENST00000438892 1767 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PDLIM1O00151 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.1□□□□□ -1.91
PDLIM1O00151 MIR23B-201ENST00000384832 97 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 MIR670-201ENST00000390142 98 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PDLIM1O00151 MIR1284-201ENST00000408337 120 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 RN7SKP111-201ENST00000410349 271 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.1□□□□□ -1.91
PDLIM1O00151 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 AL139421.1-201ENST00000423010 169 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 AC073063.1-201ENST00000434352 607 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 CST9LP2-201ENST00000437612 320 ntBASIC3.1□□□□□ -1.91
PDLIM1O00151 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.1□□□□□ -1.91
PDLIM1O00151 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.1□□□□□ -1.91
PDLIM1O00151 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.1□□□□□ -1.91
PDLIM1O00151 MTND2P19-201ENST00000449129 1012 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms