Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC027807.2-201ENST00000616099 408 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC093591.3-201ENST00000634516 308 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 EXOC5P1-201ENST00000510543 1969 ntBASIC3.79□□□□□ -1.8
LRRC53A6NM62 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC53A6NM62 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC53A6NM62 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC53A6NM62 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRC53A6NM62 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRC53A6NM62 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRC53A6NM62 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRC53A6NM62 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LRRC53A6NM62 FRG1CP-201ENST00000358464 769 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 SNORD9-201ENST00000362566 104 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 U3.4-201ENST00000363352 213 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 MIR135A2-201ENST00000384854 100 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRC53A6NM62 MTCO3P12-201ENST00000416718 547 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 AC099677.1-201ENST00000420575 175 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 AL159169.1-201ENST00000421119 127 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRC53A6NM62 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRC53A6NM62 AC112653.1-201ENST00000443851 386 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 AC009961.3-201ENST00000449832 765 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRC53A6NM62 RPS4XP2-201ENST00000458402 793 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 AC010401.1-201ENST00000463867 348 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 TMED11P-201ENST00000479478 690 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 AC068724.1-201ENST00000487100 792 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 CEACAMP10-202ENST00000495431 496 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 MTND5P13-201ENST00000513046 1079 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 MIR2276-201ENST00000516886 89 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 RNU6-528P-201ENST00000516926 100 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 RNU6-1231P-201ENST00000517185 103 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.78□□□□□ -1.8
LRRC53A6NM62 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRC53A6NM62 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 MIR548AB-201ENST00000584917 84 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 UBE2L4-201ENST00000587688 464 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 AL031985.2-201ENST00000600955 480 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 AC012065.4-201ENST00000602445 679 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 AC007687.1-201ENST00000602704 304 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 AP001981.2-201ENST00000603241 418 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 U4.6-201ENST00000621618 127 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 AL353748.2-201ENST00000622148 471 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
LRRC53A6NM62 AL158801.5-201ENST00000623123 465 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 AP001486.2-201ENST00000561652 5113 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRC53A6NM62 AC066616.2-201ENST00000559334 1481 ntBASIC3.78□□□□□ -1.8
LRRC53A6NM62 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC53A6NM62 AL513302.2-201ENST00000562313 1842 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC53A6NM62 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC53A6NM62 AC004925.1-201ENST00000624256 2706 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC53A6NM62 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC53A6NM62 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC53A6NM62 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC53A6NM62 SNORA7.2-201ENST00000364446 145 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 RNU6-1074P-201ENST00000383995 104 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 RNU6-809P-201ENST00000384461 107 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 RNU6-114P-201ENST00000384704 105 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 RPL17P36-201ENST00000420302 549 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 AL137014.1-201ENST00000420490 1226 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 BX679664.1-201ENST00000434429 253 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 THAP5P1-201ENST00000439089 262 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 RPS24P6-201ENST00000452670 400 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 RPL31P3-201ENST00000458430 332 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 AC007537.2-201ENST00000472093 511 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 AC023598.1-201ENST00000472521 361 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 AC116337.2-201ENST00000477662 156 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 AP000797.1-201ENST00000478870 387 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 AC092451.1-201ENST00000480211 153 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 AC096751.1-202ENST00000502691 1067 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 MTND4LP18-201ENST00000526864 291 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 AC109635.4-202ENST00000531666 412 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 AC136624.4-201ENST00000573044 370 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 AC011451.2-201ENST00000604303 598 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 AC135507.1-201ENST00000607214 561 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 AC239868.4-201ENST00000608318 671 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 AC015967.1-201ENST00000619893 476 ntBASIC3.77□□□□□ -1.81
LRRC53A6NM62 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.77□□□□□ -1.81
LRRC53A6NM62 AP003399.1-201ENST00000637534 361 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms