Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 SNORA51.1-201ENST00000363243 140 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 RNU6-639P-201ENST00000384074 107 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 Y_RNA.445-201ENST00000384168 102 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 MIR514A2-201ENST00000385131 88 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 MIR514A3-201ENST00000385132 88 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC092642.1-201ENST00000392417 425 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC244098.2-201ENST00000422068 99 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 Z82205.1-201ENST00000428456 297 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 RPS17P8-201ENST00000434525 335 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AL451139.1-201ENST00000434718 346 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC114495.1-201ENST00000441274 436 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 IPO7P1-201ENST00000442031 636 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 snoU109.4-201ENST00000458953 143 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC006512.1-201ENST00000468816 291 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 MTND4P17-201ENST00000470444 350 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC068587.1-201ENST00000483613 781 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC078817.1-201ENST00000492623 435 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC140172.1-201ENST00000502928 141 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AK3P4-201ENST00000504283 583 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 HSPD1P15-201ENST00000505573 1122 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC006499.3-201ENST00000506077 748 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 RN7SKP66-201ENST00000516681 231 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 SNORA25.17-201ENST00000517184 124 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC053481.3-201ENST00000577881 843 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC006270.2-201ENST00000578523 652 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC105224.1-201ENST00000587055 421 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC016925.2-201ENST00000605108 242 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AL080274.1-201ENST00000605565 220 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC004908.2-201ENST00000609090 574 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AL132822.1-201ENST00000617063 513 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 7SK.10-201ENST00000621414 298 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 CR381572.2-201ENST00000624852 397 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AL359922.3-201ENST00000624779 1670 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 AC097714.1-201ENST00000511272 1647 ntBASIC3.81□□□□□ -1.8
CGB1A6NKQ9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CGB1A6NKQ9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AC126323.6-202ENST00000568092 3511 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AL672167.1-203ENST00000641299 2975 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 Y_RNA.146-201ENST00000363549 102 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 RNU6-831P-201ENST00000384548 107 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 MIR765-201ENST00000390226 114 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 U3.30-201ENST00000391308 210 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 EI24P1-201ENST00000416584 867 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 RPL36AP36-201ENST00000418616 301 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 MRPS18BP2-201ENST00000434310 759 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 RPS20P5-201ENST00000434808 360 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AC073850.1-201ENST00000449243 255 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AC005297.2-201ENST00000450430 606 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 CYCSP34-201ENST00000458172 304 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 Y_RNA.635-201ENST00000459041 101 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 AP000873.1-201ENST00000463987 400 ntBASIC3.8□□□□□ -1.8
CGB1A6NKQ9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.8□□□□□ -1.8
CGB1A6NKQ9 ST13P14-201ENST00000474095 734 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms