Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 COX7A2P2-201ENST00000505291 250 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC010486.2-201ENST00000505572 483 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC024589.1-201ENST00000512207 263 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 PHBP14-201ENST00000512887 367 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 COX6CP8-201ENST00000522620 226 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC090616.2-202ENST00000584248 222 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC010928.3-201ENST00000587712 541 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 BBIP1P1-201ENST00000602999 279 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC068313.1-201ENST00000604028 1008 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC010738.1-201ENST00000604970 987 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC018714.1-201ENST00000605028 208 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC055876.5-201ENST00000605667 259 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AL390208.1-201ENST00000605885 644 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 VIS1.1-201ENST00000610517 203 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AL591516.1-201ENST00000611326 274 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AL603755.1-201ENST00000619504 163 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AL031667.3-201ENST00000620124 655 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC018692.3-201ENST00000623929 123 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC004777.1-201ENST00000624317 287 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 SRP72P2-201ENST00000344851 1979 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC011477.1-204ENST00000623416 1325 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC244517.1-201ENST00000606030 2086 ntBASIC3.12□□□□□ -1.91
TRBV5-4A0A0C4DH59 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 OR1S2-201ENST00000302592 978 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 RNU6-335P-201ENST00000364563 113 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 RNU6-723P-201ENST00000383973 107 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 EI24P1-201ENST00000416584 867 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AL365203.2-201ENST00000423444 196 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 UBE2D3P1-201ENST00000436669 444 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 OR6K5P-201ENST00000447050 945 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 PAXBP1P1-201ENST00000449315 447 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 BX322784.1-201ENST00000455793 1077 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 RPS20P32-201ENST00000456044 356 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 RPL23AP14-201ENST00000468281 468 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 RPL7P49-201ENST00000471402 708 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC104563.1-201ENST00000476147 376 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 OR6C7P-201ENST00000547875 934 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC136618.2-201ENST00000575091 400 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC090615.1-201ENST00000577519 154 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 SNRPGP15-201ENST00000600149 222 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 SRGNP1-201ENST00000603392 451 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC128687.1-201ENST00000605304 619 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC011816.2-201ENST00000607089 556 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AL596245.1-201ENST00000618994 362 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC078883.4-201ENST00000623218 367 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC079248.2-201ENST00000623779 326 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 AC007671.2-201ENST00000637344 619 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 MIR7153-201ENST00000637758 57 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 MIR622-201ENST00000638396 96 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 MTND5P1-201ENST00000445440 1375 ntBASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
TRBV5-4A0A0C4DH59 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 RNA5SP167-201ENST00000365461 116 ntBASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 MIR708-201ENST00000390708 88 ntBASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 MIR320C1-201ENST00000408566 88 ntBASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 RNA5SP239-201ENST00000410218 129 ntBASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 RPL32P35-201ENST00000415214 394 ntBASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 MTND1P20-201ENST00000430341 950 ntBASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 RPS6P12-201ENST00000432491 726 ntBASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 UBE2FP3-201ENST00000436366 524 ntBASIC3.1□□□□□ -1.91
TRBV5-4A0A0C4DH59 MTCYBP39-201ENST00000437562 491 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms