Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 AA414768-201ENSMUST00000121924 1257 ntBASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Gm29518-201ENSMUST00000190858 372 ntBASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5538W4VSP6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.68■□□□□ 0.26
Gm5538W4VSP6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5538W4VSP6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5538W4VSP6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Gm11950-201ENSMUST00000121615 838 ntBASIC16.65■□□□□ 0.26
Gm5538W4VSP6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5538W4VSP6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Gm5538W4VSP6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Gm5538W4VSP6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Gm5538W4VSP6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm5538W4VSP6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Gm5538W4VSP6 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.64■□□□□ 0.25
Gm5538W4VSP6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm5538W4VSP6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm5538W4VSP6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm5538W4VSP6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm5538W4VSP6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Gm5538W4VSP6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm5538W4VSP6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms