Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh17Q9R100 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh17Q9R100 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Cdh17Q9R100 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Cdh17Q9R100 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.94■□□□□ 0.14
Cdh17Q9R100 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh17Q9R100 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.94■□□□□ 0.14
Cdh17Q9R100 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh17Q9R100 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
Cdh17Q9R100 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh17Q9R100 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh17Q9R100 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cdh17Q9R100 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh17Q9R100 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh17Q9R100 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.93■□□□□ 0.14
Cdh17Q9R100 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh17Q9R100 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.93■□□□□ 0.14
Cdh17Q9R100 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.93■□□□□ 0.14
Cdh17Q9R100 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh17Q9R100 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.93■□□□□ 0.14
Cdh17Q9R100 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh17Q9R100 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh17Q9R100 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh17Q9R100 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh17Q9R100 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Cdh17Q9R100 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh17Q9R100 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Gm11336-201ENSMUST00000118168 334 ntBASIC15.92■□□□□ 0.14
Cdh17Q9R100 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.92■□□□□ 0.14
Cdh17Q9R100 Gm29707-201ENSMUST00000196325 491 ntBASIC15.92■□□□□ 0.14
Cdh17Q9R100 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh17Q9R100 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.91■□□□□ 0.14
Cdh17Q9R100 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.91■□□□□ 0.14
Cdh17Q9R100 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.91■□□□□ 0.14
Cdh17Q9R100 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh17Q9R100 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.9■□□□□ 0.14
Cdh17Q9R100 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Cdh17Q9R100 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh17Q9R100 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.89■□□□□ 0.13
Cdh17Q9R100 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh17Q9R100 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh17Q9R100 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh17Q9R100 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh17Q9R100 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Cdh17Q9R100 Gm13559-201ENSMUST00000120476 863 ntBASIC15.89■□□□□ 0.13
Cdh17Q9R100 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.89■□□□□ 0.13
Cdh17Q9R100 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.89■□□□□ 0.13
Cdh17Q9R100 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms