Protein–RNA interactions for Protein: Q9EPE9

Atp13a1, Manganese-transporting ATPase 13A1, mousemouse

Known RBP Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a1Q9EPE9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a1Q9EPE9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a1Q9EPE9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Atp13a1Q9EPE9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a1Q9EPE9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a1Q9EPE9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a1Q9EPE9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Atp13a1Q9EPE9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a1Q9EPE9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a1Q9EPE9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a1Q9EPE9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a1Q9EPE9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.61■□□□□ 0.41
Atp13a1Q9EPE9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a1Q9EPE9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Atp13a1Q9EPE9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a1Q9EPE9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.6■□□□□ 0.41
Atp13a1Q9EPE9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.6■□□□□ 0.41
Atp13a1Q9EPE9 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.6■□□□□ 0.41
Atp13a1Q9EPE9 Mir8098-201ENSMUST00000184011 137 ntBASIC17.6■□□□□ 0.41
Atp13a1Q9EPE9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Atp13a1Q9EPE9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a1Q9EPE9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Atp13a1Q9EPE9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a1Q9EPE9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Atp13a1Q9EPE9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a1Q9EPE9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a1Q9EPE9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atp13a1Q9EPE9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.58■□□□□ 0.41
Atp13a1Q9EPE9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atp13a1Q9EPE9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atp13a1Q9EPE9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 Gm5864-201ENSMUST00000202263 970 ntBASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atp13a1Q9EPE9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atp13a1Q9EPE9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a1Q9EPE9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a1Q9EPE9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a1Q9EPE9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Atp13a1Q9EPE9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a1Q9EPE9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Atp13a1Q9EPE9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a1Q9EPE9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.56■□□□□ 0.4
Atp13a1Q9EPE9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a1Q9EPE9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Atp13a1Q9EPE9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.56■□□□□ 0.4
Atp13a1Q9EPE9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atp13a1Q9EPE9 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.56■□□□□ 0.4
Atp13a1Q9EPE9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms