Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Gm6745-201ENSMUST00000199216 526 ntBASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd1Q9D0E3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Gm25287-201ENSMUST00000103846 110 ntBASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Gm22918-201ENSMUST00000103855 110 ntBASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Gm13453-201ENSMUST00000118708 357 ntBASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Thap2-203ENSMUST00000218989 527 ntBASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Lysmd1Q9D0E3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Gm9682-201ENSMUST00000197505 556 ntBASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Lysmd1Q9D0E3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lysmd1Q9D0E3 Notumos-201ENSMUST00000151998 2659 ntBASIC17.39■□□□□ 0.37
Lysmd1Q9D0E3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd1Q9D0E3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd1Q9D0E3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Lysmd1Q9D0E3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd1Q9D0E3 Gm15824-201ENSMUST00000119516 955 ntBASIC17.39■□□□□ 0.37
Lysmd1Q9D0E3 Rpph1-201ENSMUST00000175096 319 ntBASIC17.39■□□□□ 0.37
Lysmd1Q9D0E3 Gm18057-201ENSMUST00000208220 503 ntBASIC17.39■□□□□ 0.37
Lysmd1Q9D0E3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.39■□□□□ 0.37
Lysmd1Q9D0E3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd1Q9D0E3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd1Q9D0E3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd1Q9D0E3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd1Q9D0E3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd1Q9D0E3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Lysmd1Q9D0E3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lysmd1Q9D0E3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms