Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn1Q9CWM4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn1Q9CWM4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn1Q9CWM4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn1Q9CWM4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn1Q9CWM4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn1Q9CWM4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn1Q9CWM4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn1Q9CWM4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn1Q9CWM4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pfdn1Q9CWM4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pfdn1Q9CWM4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn1Q9CWM4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Gm29791-202ENSMUST00000207888 369 ntBASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn1Q9CWM4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms