Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Gm14859-201ENSMUST00000117752 357 ntBASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Gm18115-201ENSMUST00000221209 621 ntBASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga4Q91XY4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhga4Q91XY4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga4Q91XY4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga4Q91XY4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga4Q91XY4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Pcdhga4Q91XY4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga4Q91XY4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga4Q91XY4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga4Q91XY4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga4Q91XY4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhga4Q91XY4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhga4Q91XY4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Gm13186-201ENSMUST00000118031 316 ntBASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhga4Q91XY4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Gm37722-201ENSMUST00000193757 208 ntBASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Gm10566-201ENSMUST00000086739 996 ntBASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhga4Q91XY4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms