Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Gm22697-201ENSMUST00000175194 63 ntBASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Gm18032-201ENSMUST00000222541 538 ntBASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cacnb1Q8R3Z5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Gm1866-201ENSMUST00000120701 477 ntBASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Gm12001-201ENSMUST00000121727 913 ntBASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Mir1668-201ENSMUST00000184114 107 ntBASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 AC129017.2-201ENSMUST00000226118 1284 ntBASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cacnb1Q8R3Z5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Cacnb1Q8R3Z5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 AC154849.3-201ENSMUST00000223733 1660 ntBASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Gm13186-201ENSMUST00000118031 316 ntBASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cacnb1Q8R3Z5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacnb1Q8R3Z5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacnb1Q8R3Z5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacnb1Q8R3Z5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacnb1Q8R3Z5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cacnb1Q8R3Z5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Cacnb1Q8R3Z5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Cacnb1Q8R3Z5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cacnb1Q8R3Z5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.44■□□□□ 0.54
Cacnb1Q8R3Z5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cacnb1Q8R3Z5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.44■□□□□ 0.54
Cacnb1Q8R3Z5 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms