Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cchcr1Q8K2I2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cchcr1Q8K2I2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cchcr1Q8K2I2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Gm36967-201ENSMUST00000193814 266 ntBASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Gm10566-201ENSMUST00000086739 996 ntBASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cchcr1Q8K2I2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Mir5130-201ENSMUST00000175160 84 ntBASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cchcr1Q8K2I2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cchcr1Q8K2I2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cchcr1Q8K2I2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cchcr1Q8K2I2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cchcr1Q8K2I2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cchcr1Q8K2I2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.28■□□□□ 0.68
Cchcr1Q8K2I2 Gm26039-201ENSMUST00000158152 144 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms