Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Gm15372-201ENSMUST00000120729 834 ntBASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rbm28Q8CGC6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Rbm28Q8CGC6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rbm28Q8CGC6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Gm43347-201ENSMUST00000200226 580 ntBASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbm28Q8CGC6 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Gm13312-201ENSMUST00000119631 718 ntBASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Gm10052-201ENSMUST00000168019 960 ntBASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Gm28659-201ENSMUST00000188013 759 ntBASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Gm7729-201ENSMUST00000050143 801 ntBASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rbm28Q8CGC6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 Mzt1-203ENSMUST00000227948 952 ntBASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbm28Q8CGC6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms