Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Timm23-208ENSMUST00000226683 750 ntBASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28aQ8CEI3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28aQ8CEI3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.23■□□□□ 0.35
Ccdc28aQ8CEI3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc28aQ8CEI3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Mir1199-201ENSMUST00000117015 119 ntBASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc28aQ8CEI3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.21■□□□□ 0.34
Ccdc28aQ8CEI3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms