Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rfx6Q8C7R7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx6Q8C7R7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rfx6Q8C7R7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Actl10-202ENSMUST00000226583 1501 ntBASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Odf3b-204ENSMUST00000227834 930 ntBASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx6Q8C7R7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Gm3375-201ENSMUST00000203929 796 ntBASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx6Q8C7R7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms