Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Usp1Q8BJQ2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.32■□□□□ 0.36
Usp1Q8BJQ2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp1Q8BJQ2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp1Q8BJQ2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp1Q8BJQ2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp1Q8BJQ2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp1Q8BJQ2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp1Q8BJQ2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp1Q8BJQ2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp1Q8BJQ2 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.32■□□□□ 0.36
Usp1Q8BJQ2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp1Q8BJQ2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp1Q8BJQ2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Gm6376-201ENSMUST00000209407 580 ntBASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp1Q8BJQ2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Usp1Q8BJQ2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Gm7862-201ENSMUST00000121461 292 ntBASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Gm2651-201ENSMUST00000203560 838 ntBASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms