Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 Gm10698-201ENSMUST00000182663 604 ntBASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 Mir8112-201ENSMUST00000184382 131 ntBASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 Mir7071-201ENSMUST00000184847 69 ntBASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smndc1Q8BGT7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Mtag2-201ENSMUST00000058665 714 ntBASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.89■□□□□ 0.13
Smndc1Q8BGT7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smndc1Q8BGT7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Zfp783-201ENSMUST00000095946 670 ntBASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smndc1Q8BGT7 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.86■□□□□ 0.13
Smndc1Q8BGT7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smndc1Q8BGT7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smndc1Q8BGT7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smndc1Q8BGT7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smndc1Q8BGT7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smndc1Q8BGT7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smndc1Q8BGT7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smndc1Q8BGT7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smndc1Q8BGT7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smndc1Q8BGT7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smndc1Q8BGT7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smndc1Q8BGT7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.86■□□□□ 0.13
Smndc1Q8BGT7 Gm29791-202ENSMUST00000207888 369 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms