Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf168Q80XJ2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf168Q80XJ2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf168Q80XJ2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf168Q80XJ2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf168Q80XJ2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf168Q80XJ2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf168Q80XJ2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.39■□□□□ 0.38
Rnf168Q80XJ2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Rnf168Q80XJ2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf168Q80XJ2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf168Q80XJ2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf168Q80XJ2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Rnf168Q80XJ2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.39■□□□□ 0.37
Rnf168Q80XJ2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Rnf168Q80XJ2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rnf168Q80XJ2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf168Q80XJ2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf168Q80XJ2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf168Q80XJ2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf168Q80XJ2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf168Q80XJ2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf168Q80XJ2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf168Q80XJ2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.39■□□□□ 0.37
Rnf168Q80XJ2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf168Q80XJ2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Gm13312-201ENSMUST00000119631 718 ntBASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Rprl3-201ENSMUST00000157400 290 ntBASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf168Q80XJ2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Gm10052-201ENSMUST00000168019 960 ntBASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Gm7729-201ENSMUST00000050143 801 ntBASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf168Q80XJ2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf168Q80XJ2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rnf168Q80XJ2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf168Q80XJ2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rnf168Q80XJ2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf168Q80XJ2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf168Q80XJ2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf168Q80XJ2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf168Q80XJ2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms