Protein–RNA interactions for Protein: Q80U78

Pum1, Pumilio homolog 1, mousemouse

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum1Q80U78 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pum1Q80U78 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pum1Q80U78 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pum1Q80U78 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pum1Q80U78 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pum1Q80U78 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pum1Q80U78 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pum1Q80U78 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pum1Q80U78 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Pum1Q80U78 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.17■□□□□ 0.18
Pum1Q80U78 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pum1Q80U78 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Pum1Q80U78 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.17■□□□□ 0.18
Pum1Q80U78 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pum1Q80U78 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pum1Q80U78 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pum1Q80U78 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pum1Q80U78 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pum1Q80U78 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pum1Q80U78 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pum1Q80U78 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pum1Q80U78 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pum1Q80U78 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.17■□□□□ 0.18
Pum1Q80U78 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pum1Q80U78 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pum1Q80U78 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pum1Q80U78 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Pum1Q80U78 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.16■□□□□ 0.18
Pum1Q80U78 Mir6956-201ENSMUST00000183598 62 ntBASIC16.16■□□□□ 0.18
Pum1Q80U78 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.16■□□□□ 0.18
Pum1Q80U78 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.16■□□□□ 0.18
Pum1Q80U78 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Tgds-204ENSMUST00000228543 1594 ntBASIC16.16■□□□□ 0.18
Pum1Q80U78 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pum1Q80U78 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum1Q80U78 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pum1Q80U78 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pum1Q80U78 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.15■□□□□ 0.18
Pum1Q80U78 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.15■□□□□ 0.18
Pum1Q80U78 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Gm4535-201ENSMUST00000182274 558 ntBASIC16.15■□□□□ 0.18
Pum1Q80U78 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.15■□□□□ 0.18
Pum1Q80U78 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.15■□□□□ 0.18
Pum1Q80U78 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Gm10355-201ENSMUST00000097146 517 ntBASIC16.15■□□□□ 0.18
Pum1Q80U78 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pum1Q80U78 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.15■□□□□ 0.18
Pum1Q80U78 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.15■□□□□ 0.18
Pum1Q80U78 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum1Q80U78 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pum1Q80U78 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Pum1Q80U78 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum1Q80U78 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum1Q80U78 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Pum1Q80U78 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum1Q80U78 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum1Q80U78 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum1Q80U78 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pum1Q80U78 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum1Q80U78 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pum1Q80U78 Mir3113-201ENSMUST00000175478 76 ntBASIC16.14■□□□□ 0.17
Pum1Q80U78 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.14■□□□□ 0.17
Pum1Q80U78 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms