Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vma21Q78T54 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vma21Q78T54 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.32□□□□□ -0.28
Vma21Q78T54 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.32□□□□□ -0.28
Vma21Q78T54 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Vma21Q78T54 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Vma21Q78T54 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vma21Q78T54 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vma21Q78T54 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vma21Q78T54 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Gm13168-201ENSMUST00000121771 632 ntBASIC13.31□□□□□ -0.28
Vma21Q78T54 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.31□□□□□ -0.28
Vma21Q78T54 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.31□□□□□ -0.28
Vma21Q78T54 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vma21Q78T54 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vma21Q78T54 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Vma21Q78T54 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vma21Q78T54 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Vma21Q78T54 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.31□□□□□ -0.28
Vma21Q78T54 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vma21Q78T54 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vma21Q78T54 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vma21Q78T54 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vma21Q78T54 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vma21Q78T54 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vma21Q78T54 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vma21Q78T54 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vma21Q78T54 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vma21Q78T54 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vma21Q78T54 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vma21Q78T54 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Vma21Q78T54 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.3□□□□□ -0.28
Vma21Q78T54 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vma21Q78T54 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vma21Q78T54 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vma21Q78T54 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Vma21Q78T54 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vma21Q78T54 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Vma21Q78T54 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vma21Q78T54 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vma21Q78T54 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vma21Q78T54 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vma21Q78T54 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vma21Q78T54 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vma21Q78T54 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vma21Q78T54 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vma21Q78T54 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vma21Q78T54 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vma21Q78T54 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vma21Q78T54 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Vma21Q78T54 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vma21Q78T54 Gm10653-202ENSMUST00000139570 835 ntBASIC13.29□□□□□ -0.28
Vma21Q78T54 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vma21Q78T54 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vma21Q78T54 Odf3b-204ENSMUST00000227834 930 ntBASIC13.29□□□□□ -0.28
Vma21Q78T54 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Vma21Q78T54 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vma21Q78T54 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vma21Q78T54 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vma21Q78T54 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vma21Q78T54 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Vma21Q78T54 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms