Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shc4Q6S5L9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shc4Q6S5L9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shc4Q6S5L9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shc4Q6S5L9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shc4Q6S5L9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shc4Q6S5L9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shc4Q6S5L9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shc4Q6S5L9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Gm18421-201ENSMUST00000204122 625 ntBASIC15.25■□□□□ 0.03
Shc4Q6S5L9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.25■□□□□ 0.03
Shc4Q6S5L9 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.25■□□□□ 0.03
Shc4Q6S5L9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.24■□□□□ 0.03
Shc4Q6S5L9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Gm13216-201ENSMUST00000117145 591 ntBASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Gm12895-201ENSMUST00000122214 226 ntBASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Birc2-201ENSMUST00000054878 378 ntBASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shc4Q6S5L9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shc4Q6S5L9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shc4Q6S5L9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shc4Q6S5L9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Shc4Q6S5L9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shc4Q6S5L9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shc4Q6S5L9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shc4Q6S5L9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.22■□□□□ 0.03
Shc4Q6S5L9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shc4Q6S5L9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.22■□□□□ 0.03
Shc4Q6S5L9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shc4Q6S5L9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shc4Q6S5L9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shc4Q6S5L9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.22■□□□□ 0.03
Shc4Q6S5L9 Gm34391-201ENSMUST00000203706 907 ntBASIC15.22■□□□□ 0.03
Shc4Q6S5L9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shc4Q6S5L9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms