Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rif1Q6PR54 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rif1Q6PR54 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rif1Q6PR54 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.71□□□□□ -0.21
Rif1Q6PR54 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.71□□□□□ -0.21
Rif1Q6PR54 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rif1Q6PR54 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rif1Q6PR54 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rif1Q6PR54 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rif1Q6PR54 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rif1Q6PR54 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rif1Q6PR54 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rif1Q6PR54 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Rif1Q6PR54 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rif1Q6PR54 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rif1Q6PR54 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.71□□□□□ -0.22
Rif1Q6PR54 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.71□□□□□ -0.22
Rif1Q6PR54 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.71□□□□□ -0.22
Rif1Q6PR54 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rif1Q6PR54 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rif1Q6PR54 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rif1Q6PR54 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rif1Q6PR54 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rif1Q6PR54 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Gm14928-201ENSMUST00000120198 477 ntBASIC13.7□□□□□ -0.22
Rif1Q6PR54 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.7□□□□□ -0.22
Rif1Q6PR54 Gm18421-201ENSMUST00000204122 625 ntBASIC13.7□□□□□ -0.22
Rif1Q6PR54 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rif1Q6PR54 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.69□□□□□ -0.22
Rif1Q6PR54 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Gm17968-201ENSMUST00000194902 784 ntBASIC13.69□□□□□ -0.22
Rif1Q6PR54 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rif1Q6PR54 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.69□□□□□ -0.22
Rif1Q6PR54 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rif1Q6PR54 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rif1Q6PR54 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Fst-202ENSMUST00000223640 2612 ntBASIC13.68□□□□□ -0.22
Rif1Q6PR54 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rif1Q6PR54 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms