Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six2Q62232 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six2Q62232 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six2Q62232 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Six2Q62232 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.43■□□□□ 0.38
Six2Q62232 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Six2Q62232 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Six2Q62232 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Six2Q62232 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Six2Q62232 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.42■□□□□ 0.38
Six2Q62232 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.42■□□□□ 0.38
Six2Q62232 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.42■□□□□ 0.38
Six2Q62232 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six2Q62232 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.41■□□□□ 0.38
Six2Q62232 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Six2Q62232 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six2Q62232 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six2Q62232 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.41■□□□□ 0.38
Six2Q62232 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six2Q62232 Mir770-201ENSMUST00000103252 94 ntBASIC17.41■□□□□ 0.38
Six2Q62232 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Six2Q62232 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six2Q62232 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six2Q62232 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six2Q62232 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six2Q62232 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six2Q62232 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six2Q62232 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six2Q62232 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six2Q62232 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six2Q62232 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.41■□□□□ 0.38
Six2Q62232 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six2Q62232 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six2Q62232 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six2Q62232 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six2Q62232 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.4■□□□□ 0.38
Six2Q62232 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six2Q62232 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.4■□□□□ 0.38
Six2Q62232 Gm10013-201ENSMUST00000106074 672 ntBASIC17.4■□□□□ 0.38
Six2Q62232 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.4■□□□□ 0.38
Six2Q62232 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Six2Q62232 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six2Q62232 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six2Q62232 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six2Q62232 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six2Q62232 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six2Q62232 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Six2Q62232 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six2Q62232 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Six2Q62232 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six2Q62232 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Six2Q62232 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Six2Q62232 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Six2Q62232 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Six2Q62232 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Six2Q62232 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Six2Q62232 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six2Q62232 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six2Q62232 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six2Q62232 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Six2Q62232 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six2Q62232 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Six2Q62232 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.39■□□□□ 0.37
Six2Q62232 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six2Q62232 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.39■□□□□ 0.37
Six2Q62232 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.39■□□□□ 0.37
Six2Q62232 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Six2Q62232 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.39■□□□□ 0.37
Six2Q62232 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six2Q62232 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six2Q62232 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.39■□□□□ 0.37
Six2Q62232 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Six2Q62232 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Six2Q62232 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.38■□□□□ 0.37
Six2Q62232 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Six2Q62232 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Six2Q62232 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Six2Q62232 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms