Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Gm10355-201ENSMUST00000097146 517 ntBASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trav6-2Q5R1I4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Gm27525-201ENSMUST00000184465 107 ntBASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-2Q5R1I4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Gm12350-201ENSMUST00000121208 462 ntBASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Gm12497-201ENSMUST00000138778 237 ntBASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Gm36967-201ENSMUST00000193814 266 ntBASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-2Q5R1I4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms