Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Gm12382-201ENSMUST00000122005 922 ntBASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Gm6576-201ENSMUST00000169678 883 ntBASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Gm18025-201ENSMUST00000221733 862 ntBASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8d-1Q5R1H8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Gm11643-201ENSMUST00000119578 864 ntBASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8d-1Q5R1H8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8d-1Q5R1H8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.27
Trav8d-1Q5R1H8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav8d-1Q5R1H8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav8d-1Q5R1H8 Prob1-201ENSMUST00000097619 3021 ntBASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms