Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav3-3Q5R1C3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trav3-3Q5R1C3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav3-3Q5R1C3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms