Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.34■□□□□ 0.21
Fam196aQ3USH1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fam196aQ3USH1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fam196aQ3USH1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fam196aQ3USH1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fam196aQ3USH1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Fam196aQ3USH1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fam196aQ3USH1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fam196aQ3USH1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fam196aQ3USH1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fam196aQ3USH1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Fam196aQ3USH1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Fam196aQ3USH1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Fam196aQ3USH1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Fam196aQ3USH1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Fam196aQ3USH1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Fam196aQ3USH1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Fam196aQ3USH1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
Fam196aQ3USH1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.33■□□□□ 0.2
Fam196aQ3USH1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fam196aQ3USH1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Fam196aQ3USH1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Fam196aQ3USH1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Fam196aQ3USH1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.33■□□□□ 0.2
Fam196aQ3USH1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Fam196aQ3USH1 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.33■□□□□ 0.2
Fam196aQ3USH1 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.33■□□□□ 0.2
Fam196aQ3USH1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Fam196aQ3USH1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fam196aQ3USH1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.33■□□□□ 0.2
Fam196aQ3USH1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam196aQ3USH1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.31■□□□□ 0.2
Fam196aQ3USH1 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Fam196aQ3USH1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Fam196aQ3USH1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fam196aQ3USH1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Fam196aQ3USH1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fam196aQ3USH1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fam196aQ3USH1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms